Microbiology & Immunology - Research Publications

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    MAIT cells contribute to protection against lethal influenza infection in vivo
    van Wilgenburg, B ; Loh, L ; Chen, Z ; Pediongco, TJ ; Wang, H ; Shi, M ; Zhao, Z ; Koutsakos, M ; Nussing, S ; Sant, S ; Wang, Z ; D'Souza, C ; Jia, X ; Almeida, CF ; Kostenko, L ; Eckle, SBG ; Meehan, BS ; Kallies, A ; Godfrey, DI ; Reading, PC ; Corbett, AJ ; McCluskey, J ; Klenerman, P ; Kedzierska, K ; Hinks, TSC (NATURE PUBLISHING GROUP, 2018-11-09)
    Mucosal associated invariant T (MAIT) cells are evolutionarily-conserved, innate-like lymphocytes which are abundant in human lungs and can contribute to protection against pulmonary bacterial infection. MAIT cells are also activated during human viral infections, yet it remains unknown whether MAIT cells play a significant protective or even detrimental role during viral infections in vivo. Using murine experimental challenge with two strains of influenza A virus, we show that MAIT cells accumulate and are activated early in infection, with upregulation of CD25, CD69 and Granzyme B, peaking at 5 days post-infection. Activation is modulated via cytokines independently of MR1. MAIT cell-deficient MR1-/- mice show enhanced weight loss and mortality to severe (H1N1) influenza. This is ameliorated by prior adoptive transfer of pulmonary MAIT cells in both immunocompetent and immunodeficient RAG2-/-γC-/- mice. Thus, MAIT cells contribute to protection during respiratory viral infections, and constitute a potential target for therapeutic manipulation.
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    A three-stage intrathymic development pathway for the mucosal-associated invariant T cell lineage
    Koay, H-F ; Gherardin, NA ; Enders, A ; Loh, L ; Mackay, LK ; Almeida, CF ; Russ, BE ; Nold-Petry, CA ; Nold, MF ; Bedoui, S ; Chen, Z ; Corbett, AJ ; Eckle, SBG ; Meehan, B ; d'Udekem, Y ; Konstantinov, IE ; Lappas, M ; Liu, L ; Goodnow, CC ; Fairlie, DP ; Rossjohn, J ; Chong, MM ; Kedzierska, K ; Berzins, SP ; Belz, GT ; McCluskey, J ; Uldrich, AP ; Godfrey, DI ; Pellicci, DG (NATURE PUBLISHING GROUP, 2016-11)
    Mucosal-associated invariant T cells (MAIT cells) detect microbial vitamin B2 derivatives presented by the antigen-presenting molecule MR1. Here we defined three developmental stages and checkpoints for the MAIT cell lineage in humans and mice. Stage 1 and stage 2 MAIT cells predominated in thymus, while stage 3 cells progressively increased in abundance extrathymically. Transition through each checkpoint was regulated by MR1, whereas the final checkpoint that generated mature functional MAIT cells was controlled by multiple factors, including the transcription factor PLZF and microbial colonization. Furthermore, stage 3 MAIT cell populations were expanded in mice deficient in the antigen-presenting molecule CD1d, suggestive of a niche shared by MAIT cells and natural killer T cells (NKT cells). Accordingly, this study maps the developmental pathway and checkpoints that control the generation of functional MAIT cells.
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    Identification of a Potent Microbial Lipid Antigen for Diverse NKT Cells
    Wolf, BJ ; Tatituri, RVV ; Almeida, CF ; Le Nours, J ; Bhowruth, V ; Johnson, D ; Uldrich, AP ; Hsu, F-F ; Brigl, M ; Besra, GS ; Rossjohn, J ; Godfrey, DI ; Brenner, MB (AMER ASSOC IMMUNOLOGISTS, 2015-09-15)
    Semi-invariant/type I NKT cells are a well-characterized CD1d-restricted T cell subset. The availability of potent Ags and tetramers for semi-invariant/type I NKT cells allowed this population to be extensively studied and revealed their central roles in infection, autoimmunity, and tumor immunity. In contrast, diverse/type II NKT (dNKT) cells are poorly understood because the lipid Ags that they recognize are largely unknown. We sought to identify dNKT cell lipid Ag(s) by interrogating a panel of dNKT mouse cell hybridomas with lipid extracts from the pathogen Listeria monocytogenes. We identified Listeria phosphatidylglycerol as a microbial Ag that was significantly more potent than a previously characterized dNKT cell Ag, mammalian phosphatidylglycerol. Further, although mammalian phosphatidylglycerol-loaded CD1d tetramers did not stain dNKT cells, the Listeria-derived phosphatidylglycerol-loaded tetramers did. The structure of Listeria phosphatidylglycerol was distinct from mammalian phosphatidylglycerol because it contained shorter, fully-saturated anteiso fatty acid lipid tails. CD1d-binding lipid-displacement studies revealed that the microbial phosphatidylglycerol Ag binds significantly better to CD1d than do counterparts with the same headgroup. These data reveal a highly potent microbial lipid Ag for a subset of dNKT cells and provide an explanation for its increased Ag potency compared with the mammalian counterpart.
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    Recognition of microbial and mammalian phospholipid antigens by NKT cells with diverse TCRs
    Tatituri, RVV ; Watts, GFM ; Bhowruth, V ; Barton, N ; Rothchild, A ; Hsu, F-F ; Almeida, CF ; Cox, LR ; Eggeling, L ; Cardell, S ; Rossjohn, J ; Godfrey, DI ; Behar, SM ; Besra, GS ; Brenner, MB ; Brigl, M (NATL ACAD SCIENCES, 2013-01-29)
    CD1d-restricted natural killer T (NKT) cells include two major subgroups. The most widely studied are Vα14Jα18(+) invariant NKT (iNKT) cells that recognize the prototypical α-galactosylceramide antigen, whereas the other major group uses diverse T-cell receptor (TCR) α-and β-chains, does not recognize α-galactosylceramide, and is referred to as diverse NKT (dNKT) cells. dNKT cells play important roles during infection and autoimmunity, but the antigens they recognize remain poorly understood. Here, we identified phosphatidylglycerol (PG), diphosphatidylglycerol (DPG, or cardiolipin), and phosphatidylinositol from Mycobacterium tuberculosis or Corynebacterium glutamicum as microbial antigens that stimulated various dNKT, but not iNKT, hybridomas. dNKT hybridomas showed distinct reactivities for diverse antigens. Stimulation of dNKT hybridomas by microbial PG was independent of Toll-like receptor-mediated signaling by antigen-presenting cells and required lipid uptake and/or processing. Furthermore, microbial PG bound to CD1d molecules and plate-bound PG/CD1d complexes stimulated dNKT hybridomas, indicating direct recognition by the dNKT cell TCR. Interestingly, despite structural differences in acyl chain composition between microbial and mammalian PG and DPG, lipids from both sources stimulated dNKT hybridomas, suggesting that presentation of microbial lipids and enhanced availability of stimulatory self-lipids may both contribute to dNKT cell activation during infection.