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    Systematics and biogeography of Spyridium with a focus on Spyridium parvifolium and its hybrids
    Clowes, Catherine ( 2022)
    Spyridium is a genus of c. 45 species endemic to south-western and south-eastern Australia, with a disjunct distribution across the Nullarbor Plain and Bass Strait. The genus also includes several morphologically distinct phrase name taxa. Spyridium parvifolium is a widespread and morphologically variable shrub from south-eastern Australia. Several varieties and forms of this species have been recognised, but there is disagreement on the accepted taxonomy between Australian states. Spyridium parvifolium is known to hybridise with S. daltonii in the Grampians and is thought to hybridise with S. vexilliferum in locations where these taxa co-occur in western Victoria and south-eastern South Australia. The aim of this research project was to develop a comprehensive molecular systematic understanding of Spyridium, and S. parvifolium and its hybrids, to inform the treatment of Rhamnaceae in the Flora of Australia (Kellermann et al. 2022-). The objectives were to investigate: the species circumscription and biogeographic history of Spyridium, the infraspecific taxa and phylogeographic patterns of S. parvifolium and introgression associated with this species (i.e. S. xramosissimum and S. parvifolium x S. vexilliferum). Entire chloroplast genomes (c. 160k base pairs) and the nuclear ribosomal array (18S–5.8S–26S; c. 6k base pairs) were analysed using both Bayesian and Maximum Likelihood phylogenetic methods. In total sequences from 230 samples were analysed across these phylogenies, including representatives of all recognised species of Spyridium, six phrase name taxa, seventy-two accessions of S. parvifolium, eight putative hybrids and four outgroup taxa. This study provides the most comprehensive phylogenies of Spyridium and S. parvifolium to date. For Spyridium, several biogeographic patterns were identified, including deep diverging clades of taxa endemic to Western Australia, New South Wales and Tasmania. Several taxa were identified as polyphyletic (e.g. S. eriocephalum and S. phylicoides), warranting taxonomical review. For S. parvifolium, early divergence of individuals from west of the Murray Darling Depression, isolation on the inland side of the Great Dividing Range and recent seed-mediated gene-flow across Bass Strait were identified in the chloroplast genome phylogeny. The variants of S. parvifolium were not supported as genetically distinct suggesting the infraspecific recognition of var. parvifolium and var. molle in Tasmania is not warranted. Molecular evidence of introgression between S. parvifolium and both S. daltonii and S. vexilliferum was identified, providing molecular support for hybrids also inferred from intermediate morphology. Other findings include inferred parentage, unidirectional introgression and recombination of the nuclear ribosomal array for some hybrid accessions.