Infrastructure Engineering - Research Publications
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ItemDetecting and explaining long-term changes in river water quality in south-eastern Australia(WILEY, 2022-11)Abstract Understanding the temporal changes in river water quality is important for catchment water quality management. This study aims to detect and attribute long‐term trends and abrupt changes in river water quality. We used 26 years of water quality data (1994–2020) collected from 102 river monitoring sites across Victoria, south‐eastern Australia. We analysed six water quality constituents that are of key concerns for Australian catchment management, namely: electrical conductivity (EC), total suspended solids, nitrate‐nitrite, total Kjeldahl nitrogen, total phosphorous and filtered reactive phosphorus. To detect trends and abrupt changes in water quality at each site, a Bayesian ensemble modelling approach was applied, namely, the Bayesian estimator of abrupt change, seasonal change, and trend (BEAST). To explain water quality trends, we then built multivariate regressions to link water quality with streamflow and seasonality, and then compared alternative model structures with and without a change in the regression relationships informed by the changes detected by BEAST. Among the six constituents studied, EC shows the most distinct systematic trends, with 21 sites having a significant increase followed by a non‐significant trend; within the 21 sites, 14 had a significant change point in EC around Year 2010. The regression analyses between water quality and streamflow suggested that the observed systematic change in EC could be largely related to reduced streamflow during the Millennium drought, which greatly impacted the climate and hydrology of south‐eastern Australia over the first decade of 2000. The results of this study can help inform the design of effective mitigation strategies and avoid further degradation of water quality across Victoria. Besides, our trend analysis and attribution approaches are applicable to water quality time series in other regions for robust trend analysis and change point detection.
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ItemUnderstanding event runoff coefficient variability across Australia using the hydroEvents R package(WILEY, 2022-04)Abstract Identification and pairing of hydrologic events form the basis of various analyses, from identifying events for the calibration of hydrologic models, to calculation of event runoff coefficients for catchment characterization. Despite this, there is no unified approach for identifying hydrologic events. Here, using the R package, hydroEvents (https://CRAN.R-project.org/package=hydroEvents), we compare multiple methods of extracting and pairing hydrologic events focussing on the relationship between rainfall and runoff. We find the four common analytical approaches used to identify runoff events—based on either event threshold, local maxima/minima, or proportion of baseflow contribution, give similar results. However, when rainfall events are paired to runoff, the type of algorithm and the direction of pairing (either from rainfall to runoff, or runoff to rainfall) make a considerable difference to the final event pairs identified and resulting analyses. Here, we demonstrate the value of automated event extraction and pairing algorithms for large‐sample hydrology analysis by calculating event runoff coefficients across Australia. Our results show that climatology is a key driver of catchment rainfall‐runoff response with much of Australia dominated by excess rainfall runoff generation. However, our results also show that the variability due to pairing method can introduce a variability equal to that of the climatology due to biasing the runoff mechanism within the sample. With this analysis we demonstrate the importance of systematic and consistent approaches to hydrologic characterization when identifying and pairing hydrological events.
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ItemA Bayesian approach to understanding the key factors influencing temporal variability in stream water quality: a case study in the Great Barrier Reef catchments( 2021-01-12)Abstract. Stream water quality is highly variable both across space and time. Water quality monitoring programs have collected a large amount of data that provide a good basis to investigate the key drivers of spatial and temporal variability. Event-based water quality monitoring data in the Great Barrier Reef catchments in northern Australia provides an opportunity to further our understanding of water quality dynamics in sub-tropical and tropical regions. This study investigated nine water quality constituents, including sediments, nutrients and salinity, with the aim of: 1) identifying the influential environmental drivers of temporal variation in flow event concentrations; and 2) developing a modelling framework to predict the temporal variation in water quality at multiple sites simultaneously. This study used a hierarchical Bayesian model averaging framework to explore the relationship between event concentration and catchment-scale environmental variables (e.g., runoff, rainfall and groundcover conditions). Key factors affecting the temporal changes in water quality varied among constituent concentrations, as well as between catchments. Catchment rainfall and runoff affected in-stream particulate constituents, while catchment wetness and vegetation cover had more impact on dissolved nutrient concentration and salinity. In addition, in large dry catchments, antecedent catchment soil moisture and vegetation had a large influence on dissolved nutrients, which highlights the important effect of catchment hydrological connectivity on pollutant mobilisation and delivery.
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ItemA multi-model approach to assessing the impacts of catchment characteristics on spatial water quality in the Great Barrier Reef catchments(ELSEVIER SCI LTD, 2021-11-01)Water quality monitoring programs often collect large amounts of data with limited attention given to the assessment of the dominant drivers of spatial and temporal water quality variations at the catchment scale. This study uses a multi-model approach: a) to identify the influential catchment characteristics affecting spatial variability in water quality; and b) to predict spatial variability in water quality more reliably and robustly. Tropical catchments in the Great Barrier Reef (GBR) area, Australia, were used as a case study. We developed statistical models using 58 catchment characteristics to predict the spatial variability in water quality in 32 GBR catchments. An exhaustive search method coupled with multi-model inference approaches were used to identify important catchment characteristics and predict the spatial variation in water quality across catchments. Bootstrapping and cross-validation approaches were used to assess the uncertainty in identified important factors and robustness of multi-model structure, respectively. The results indicate that water quality variables were generally most influenced by the natural characteristics of catchments (e.g., soil type and annual rainfall), while anthropogenic characteristics (i.e., land use) also showed significant influence on dissolved nutrient species (e.g., NOX, NH4 and FRP). The multi-model structures developed in this work were able to predict average event-mean concentration well, with Nash-Sutcliffe coefficient ranging from 0.68 to 0.96. This work provides data-driven evidence for catchment managers, which can help them develop effective water quality management strategies.
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ItemIn-season crop classification using optical remote sensing with random forest over irrigated agricultural fields in Australia(Copernicus Publications, 2021-03-03)<p>Timely classification of crop types is critical for agronomic planning in water use and crop production. However, crop type mapping is typically undertaken only after the cropping season, which precludes its uses in later-season water use planning and yield estimation. This study aims 1) to understand how the accuracy of crop type classification changes within cropping season and 2) to suggest the earliest time that it is possible to achieve reliable crop classification. We focused on three main summer crops (corn/maize, cotton and rice) in the Coleambally Irrigation Area (CIA), a major irrigation district in south-eastern Australia consisting of over 4000 fields, for the period of 2013 to 2019. The summer irrigation season in the CIA is from mid-August to mid-May and most farms use surface irrigation to support the growth of summer crops. We developed models that combine satellite data and farmer-reported information for in-season crop type classification. Monthly-averaged Landsat spectral bands were used as input to Random Forest algorithm. We developed multiple models trained with data initially available at the start of the cropping season, then later using all the antecedent images up to different stages within the season. We evaluated the model performance and uncertainty using a two-fold cross validation by randomly choosing training vs. validation periods. Results show that the classification accuracy increases rapidly during the first three months followed by a marginal improvement afterwards. Crops can be classified with a User&#8217;s accuracy above 70% based on the first 2-3 months after the start of the season. Cotton and rice have higher in-season accuracy than corn/maize. The resulting crop maps can be used to support activities such as later-season system scale irrigation decision-making or yield estimation at a regional scale.</p><p>Keywords: Landsat 8 OLI, in-season, multi-year, crop type, Random Forest</p>
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ItemUsing short-term ensemble weather forecast to evaluate outcomes of irrigation(Copernicus Publications, 2021-03-03)<p>Irrigation water is an expensive and limited resource. Previous studies show that irrigation scheduling can boost efficiency by 20-60%, while improving water productivity by at least 10%. In practice, scheduling decisions are often needed several days prior to an irrigation event, so a key aspect of irrigation scheduling is the accurate prediction of crop water use and soil water status ahead of time. This prediction relies on several key inputs such as soil water, weather and crop conditions. Since each input can be subject to its own uncertainty, it is important to understand how these uncertainties impact soil water prediction and subsequent irrigation scheduling decisions.</p><p>This study aims to evaluate the outcomes of alternative irrigation scheduling decisions under uncertainty, with a focus on the uncertainties arising from short-term weather forecast. To achieve this, we performed a model-based study to simulate crop root-zone soil water content, in which we comprehensively explored different combinations of ensemble short-term rainfall forecast and alternative decisions of irrigation scheduling. This modelling produced an ensemble of soil water contents to enable quantification of risks of over- and under-irrigation; these ensemble estimates were summarized to inform optimal timing of next irrigation event to minimize both the risks of stressing crop and wasting water. With inclusion of other sources of uncertainty (e.g. soil water observation, crop factor), this approach shows good potential to be extended to a comprehensive framework to support practical irrigation decision-making for farmers.</p>
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ItemEnhancing the Accuracy and Temporal Transferability of Irrigated Cropping Field Classification Using Optical Remote Sensing Imagery(MDPI, 2022-02)Mapping irrigated areas using remotely sensed imagery has been widely applied to support agricultural water management; however, accuracy is often compromised by the in-field heterogeneity of and interannual variability in crop conditions. This paper addresses these key issues. Two classification methods were employed to map irrigated fields using normalized difference vegetation index (NDVI) values derived from Landsat 7 and Landsat 8: a dynamic thresholding method (method one) and a random forest method (method two). To improve the representativeness of field-level NDVI aggregates, which are the key inputs in our methods, a Gaussian mixture model (GMM)-based filtering approach was adopted to remove noncrop pixels (e.g., trees and bare soils) and mixed pixels along the field boundary. To improve the temporal transferability of method one we dynamically determined the threshold value to account for the impact of interannual weather variability based on the dynamic range of NDVI values. In method two an innovative training sample pool was designed for the random forest modeling to enable automatic calibration for each season, which contributes to consistent performance across years. The irrigated field mapping was applied to a major irrigation district in Australia from 2011 to 2018, for summer and winter cropping seasons separately. The results showed that using GMM-based filtering can markedly improve field-level data quality and avoid up to 1/3 of omission errors for irrigated fields. Method two showed superior performance, exhibiting consistent and good accuracy (kappa > 0.9) for both seasons. The classified maps in wet winter seasons should be used with caution, because rainfall alone can largely meet plant water requirements, leaving the contribution of irrigation to the surface spectral signature weak. The approaches introduced are transferable to other areas, can support multiyear irrigated area mapping with high accuracy, and significantly reduced model development effort.
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ItemSynthesizing the impacts of baseflow contribution on concentration-discharge (C-Q) relationships across Australia using a Bayesian hierarchical model(COPERNICUS GESELLSCHAFT MBH, 2022-01-03)Abstract. Understanding concentration–discharge (C–Q) relationships can inform catchment solute and particulate export processes. Previous studies have shown that the extent to which baseflow contributes to streamflow can affect C–Q relationships in some catchments. However, the current understanding on the effects of baseflow contribution in shaping the C–Q patterns is largely derived from temperate catchments. As such, we still lack quantitative understanding of these effects across a wide range of climates (e.g. arid, tropical and subtropical). The study aims to assess how baseflow contributions, as defined by the median and the range of daily baseflow indices within individual catchments (BFI_m and BFI_range, respectively), influence C–Q slopes across 157 catchments in Australia spanning five climate zones. This study focuses on six water quality variables: electrical conductivity (EC), total phosphorus (TP), soluble reactive phosphorus (SRP), total suspended solids (TSS), the sum of nitrate and nitrite (NOx) and total nitrogen (TN). The impact of baseflow contributions is explored with a novel Bayesian hierarchical model. For sediments and nutrient species (TSS, NOx, TN and TP), we generally see largely positive C–Q slopes, which suggest a dominance of mobilization export patterns. Further, for TSS, NOx and TP we see stronger mobilization (steeper positive C–Q slopes) in catchments with higher values in both the BFI_m and BFI_range, as these two metrics are positively correlated for most catchments. The enhanced mobilization in catchments with higher BFI_m or BFI_range is likely due to the more variable flow pathways that occur in catchments with higher baseflow contributions. These variable flow pathways can lead to higher concentration gradients between low flows and high flows, where the former is generally dominated by groundwater/slow subsurface flow while the latter by surface water sources, respectively. This result highlights the crucial role of flow pathways in determining catchment exports of solutes and particulates. Our study also demonstrates the need for further studies on how the temporal variations of flow regimes and baseflow contributions influence flow pathways and the potential impacts of these flow pathways on catchment C–Q relationships.
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ItemParsimonious Gap-Filling Models for Sub-Daily Actual Evapotranspiration Observations from Eddy-Covariance Systems(MDPI, 2022-03)Missing data and low data quality are common issues in field observations of actual evapotranspiration (ETa) from eddy-covariance systems, which necessitates the need for gap-filling techniques to improve data quality and utility for further analyses. A number of models have been proposed to fill temporal gaps in ETa or latent heat flux observations. However, existing gap-filling approaches often use multi-variate models that rely on relationships between ETa and other meteorological and flux variables, highlighting a critical lack of parsimonious gap-filling models. This study aims to develop and evaluate parsimonious approaches to fill gaps in ETa observations. We adapted three gap-filling models previously used for other meteorological variables but never applied to infill sub-daily ETa or flux observations from eddy-covariance systems before. All three models are solely based on the observed diurnal patterns in the ETa data, which infill gaps in sub-daily data with sinusoidal functions (Sinusoidal), smoothing functions (Smoothing) and pattern matching (MaxCor) approaches, respectively. We presented a systematic approach for model evaluation, considering multiple patterns of data gaps during different times of the day. The three gap-filling models were evaluated together with another benchmarking gap-filling model, mean diurnal variation (MDV) that has been commonly used and has similar data requirement. We used a case study with field measurements from an EC system over summer 2020–2021, at a maize field in southeastern Australia. We identified the MaxCor model as the best gap-filling model, which informs the diurnal pattern of the day to infill by using another day with similar temporal patterns and complete data. Following the MaxCor model, the MDV and the Sinusoidal models show comparable performances. We further discussed the infilling models in terms of their dependence on data availability and their suitability for different practical situations. The MaxCor model relies on high data availability for both days with complete data and the available records within each day to infill. The Sinusoidal model does not rely on any day with complete data, which makes it the ideal choice in situations where days with complete records are limited.
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ItemA Bayesian approach to understanding the key factors influencing temporal variability in stream water quality - a case study in the Great Barrier Reef catchments(COPERNICUS GESELLSCHAFT MBH, 2021-05-20)Abstract. Stream water quality is highly variable both across space and time. Water quality monitoring programmes have collected a large amount of data that provide a good basis for investigating the key drivers of spatial and temporal variability. Event-based water quality monitoring data in the Great Barrier Reef catchments in northern Australia provide an opportunity to further our understanding of water quality dynamics in subtropical and tropical regions. This study investigated nine water quality constituents, including sediments, nutrients and salinity, with the aim of (1) identifying the influential environmental drivers of temporal variation in flow event concentrations and (2) developing a modelling framework to predict the temporal variation in water quality at multiple sites simultaneously. This study used a hierarchical Bayesian model averaging framework to explore the relationship between event concentration and catchment-scale environmental variables (e.g. runoff, rainfall and groundcover conditions). Key factors affecting the temporal changes in water quality varied among constituent concentrations and between catchments. Catchment rainfall and runoff affected in-stream particulate constituents, while catchment wetness and vegetation cover had more impact on dissolved nutrient concentration and salinity. In addition, in large dry catchments, antecedent catchment soil moisture and vegetation had a large influence on dissolved nutrients, which highlights the important effect of catchment hydrological connectivity on pollutant mobilisation and delivery.