Mechanical Engineering - Research Publications

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    Haemodynamics of stent-mounted neural interfaces in tapered and deformed blood vessels
    Qi, W ; Ooi, A ; Grayden, DB ; Opie, NL ; John, SE (NATURE PORTFOLIO, 2024-03-27)
    The endovascular neural interface provides an appealing minimally invasive alternative to invasive brain electrodes for recording and stimulation. However, stents placed in blood vessels have long been known to affect blood flow (haemodynamics) and lead to neointimal growth within the blood vessel. Both the stent elements (struts and electrodes) and blood vessel wall geometries can affect the mechanical environment on the blood vessel wall, which could lead to unfavourable vascular remodelling after stent placement. With increasing applications of stents and stent-like neural interfaces in venous blood vessels in the brain, it is necessary to understand how stents affect blood flow and tissue growth in veins. We explored the haemodynamics of a stent-mounted neural interface in a blood vessel model. Results indicated that blood vessel deformation and tapering caused a substantial change to the lumen geometry and the haemodynamics. The neointimal proliferation was evaluated in sheep implanted with an endovascular neural interface. Analysis showed a negative correlation with the mean Wall Shear Stress pattern. The results presented here indicate that the optimal stent oversizing ratio must be considered to minimise the haemodynamic impact of stenting.
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    Effect of stratification on the propagation of a cylindrical gravity current
    Lam, WK ; Chan, L ; Sutherland, D ; Manasseh, R ; Moinuddin, K ; Ooi, A (CAMBRIDGE UNIV PRESS, 2024-03-22)
    Direct numerical simulations (DNSs) of three-dimensional cylindrical release gravity currents in a linearly stratified ambient are presented. The simulations cover a range of stratification strengths $0< S\leq 0.8$ (where $S=(\rho _b^*-\rho _0^*)/(\rho _c^*-\rho _0^*), \rho _b^*, \rho _0^*$ and $\rho _c^*$ are the dimensional density at the bottom of the domain, top of the domain and the dense fluid, respectively) at two different Reynolds numbers. A comparison between the stratified and unstratified cases illustrates the influence of stratification strength on the dynamics of cylindrical gravity currents. Specifically, the front velocity in the slumping phase decreases with increasing stratification strength whereas the duration of the slumping phase increases with increments of $S$ . The Froude number calculated in this phase shows a good agreement with models proposed by Ungarish & Huppert (J. Fluid Mech., vol. 458, 2002, pp. 283–301) and Ungarish (J. Fluid Mech., vol. 548, 2006, pp. 49–68), originally developed for planar gravity currents in a stratified ambient. In the inertial phase, the front velocity across cases with different stratification strengths adheres to a power-law scaling with an exponent of $-$ 1/2. Higher Reynolds numbers led to more frequent lobe splitting and merging, with lobe size diminishing as stratification strength increased. Strong interactions among inner vortex rings occurred during the slumping phase, leading to the early formation of hairpin vortices in weakly stratified cases, while strongly stratified cases exhibited delayed vortex formation and less turbulence.
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    Computational Fluid Dynamics of Stent-Mounted Neural Interfaces in an Idealized Cerebral Venous Sinus
    Qi, W ; Ooi, A ; Grayden, DB ; John, SE (IEEE, 2023)
    Hemodynamic changes in stented blood vessels play a critical role in stent-associated complications. The majority of work on the hemodynamics of stented blood vessels has focused on coronary arteries but not cerebral venous sinuses. With the emergence of endovascular electrophysiology, there is a growing interest in stenting cerebral blood vessels. We investigated the hemodynamic impact of a stent-mounted neural interface inside the cerebral venous sinus. The stent was virtually implanted into an idealized superior sagittal sinus (SSS) model. Local venous blood flow was simulated. Results showed that blood flow was altered by the stent, generating recirculation and low wall shear stress (WSS) around the device. However, the effect of the electrodes on blood flow was not prominent due to their small size. This is an early exploration of the hemodynamics of a stent-mounted neural interface. Future work will shed light on the key factors that influence blood flow and stenting outcomes.Clinical Relevance-The study investigates blood flow through a stent-based electrode array inside the cerebral venous sinus. The hemodynamic impact of the stent can provide insight into neointimal growth and thrombus formation.
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    Effect of straight riblets of the underlying surface on wall bounded flow drag
    Chan, L ; Kevin, ; Skvortsov, A ; Ooi, A (Elsevier BV, 2023-08-01)
    Direct numerical simulations of thin, straight riblets were conducted to investigate the physical mechanisms involved when the inertial effects within the ribs become important. The main parameter that we assess here is the ribs’ height to spacing ratio (a=h/s). In all cases, ‘k’-type behaviour was observed despite the absence of the pressure drag component. This trend also refers to the destruction of the near-wall cycles and was indicated by the shortening of Reynolds stress structures, mimicking the flows over rough walls. Closely-packed ribs with large h/s have a tendency to generate Kelvin–Helmholtz (KH) like structures at the tips, inducing large pressure fluctuations. Conversely, sparser ribs with low h/s trigger the formation of large mean secondary flows that suppress the pressure fluctuations. We further split the drag contribution of these distinct flow features by decomposing the roughness function into the dispersive and the Reynolds-stress terms. This analysis concludes that the fully-rough (logarithmic) scaling within the drag-increasing regime is transitional, and as the Reynolds number increases, deviates to a more gradual power-law scaling due to the drag increasing mechanism of streamwise aligned secondary motions.
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    Flows past cylinders confined within ducts. Effects of the duct width
    Lu, W ; Nguyen, QD ; Chan, L ; Lei, C ; Ooi, A (ELSEVIER SCIENCE INC, 2023-12)
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    Toward More General Turbulence Models via Multicase Computational-Fluid-Dynamics-Driven Training
    Fang, Y ; Zhao, Y ; Waschkowski, F ; Ooi, ASH ; Sandberg, RD (AMER INST AERONAUTICS ASTRONAUTICS, 2023-05)
    The accuracy of machine-learned turbulence models often diminishes when applied to flow cases outside the training data set. In an effort to improve the predictive accuracy of data-driven models for an expanded set of cases, an extension of a computational fluid dynamics (CFD)-driven training framework consisting of three key steps is proposed. Firstly, a list of candidate flow-related parameters is selected to supplement Pope’s general tensor basis hypothesis. Secondly, modeling an additional production term may benefit the overall predictions in certain situations. Finally, the Reynolds-averaged Navier–Stokes (RANS) evaluations of candidate models are performed on several different flows simultaneously during the model training iterations. Five free-shear and five wall-bounded flow cases are chosen to train or test data-driven turbulence models. It is shown that the machine-learned models from the present multicase CFD-driven framework can significantly improve the predictive accuracy for the test cases where the baseline RANS results showed significant error from the ground truth. Meanwhile, for cases in which the baseline produced good results, the new models do not perform worse. Further analysis shows that the new models can adapt to opposite trends of turbulent diffusion required for the different cases with a common correction. Moreover, the trained models can be simplified and still achieve similar improvement as the whole expressions.
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    Vascular remodeling in sheep implanted with endovascular neural interface
    John, SE ; Donegan, S ; Scordas, TC ; Qi, W ; Sharma, P ; Liyanage, K ; Wilson, S ; Birchall, I ; Ooi, A ; Oxley, TJ ; May, CN ; Grayden, DB ; Opie, NL (IOP Publishing Ltd, 2022-10-01)
    Objective.The aim of this work was to assess vascular remodeling after the placement of an endovascular neural interface (ENI) in the superior sagittal sinus (SSS) of sheep. We also assessed the efficacy of neural recording using an ENI.Approach.The study used histological analysis to assess the composition of the foreign body response. Micro-CT images were analyzed to assess the profiles of the foreign body response and create a model of a blood vessel. Computational fluid dynamic modeling was performed on a reconstructed blood vessel to evaluate the blood flow within the vessel. Recording of brain activity in sheep was used to evaluate efficacy of neural recordings.Main results.Histological analysis showed accumulated extracellular matrix material in and around the implanted ENI. The extracellular matrix contained numerous macrophages, foreign body giant cells, and new vascular channels lined by endothelium. Image analysis of CT slices demonstrated an uneven narrowing of the SSS lumen proportional to the stent material within the blood vessel. However, the foreign body response did not occlude blood flow. The ENI was able to record epileptiform spiking activity with distinct spike morphologies.Significance. This is the first study to show high-resolution tissue profiles, the histological response to an implanted ENI and blood flow dynamic modeling based on blood vessels implanted with an ENI. The results from this study can be used to guide surgical planning and future ENI designs; stent oversizing parameters to blood vessel diameter should be considered to minimize detrimental vascular remodeling.
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    Asymmetric wakes in flows past circular cylinders confined in channels
    Lu, W ; Aljubaili, D ; Zahtila, T ; Chan, L ; Ooi, A (CAMBRIDGE UNIV PRESS, 2023-02-27)
    In this paper, we investigate the flow past a circular cylinder confined in a channel at a blockage ratio of $\beta =0.7$ (the ratio of the cylinder diameter and the channel height) for Reynolds numbers between ${\textit {Re}}=300$ and $3900$ using direct numerical simulation (DNS). We show for varying Reynolds numbers a wide range of wake dynamics occur as the spanwise domain length is changed. At a lower Reynolds number of ${\textit {Re}}=300$ , a reverse von Kármán wake alongside either a top- or bottom-biased asymmetry was observed at different spanwise locations. The asymmetry was structurally similar the two-dimensional asymmetry studied by prior investigators, and was found to be a result of the confinement effect. Further, wake-jumping between the two intermittent states was present. For larger Reynolds numbers, ${\textit {Re}}=1000$ and $3900$ , these asymmetric structures were found to become dominant. We also examine the dependence of the asymmetries on the spanwise domain. For small spanwise domains the asymmetries were uniformly orientated across the span. In contrast, for sufficiently large spanwise domains, the asymmetry flips its orientation at different spanwise locations. Comparisons of flow statistics demonstrate good agreement between the different spanwise domains, which suggests the same mechanism maintains the asymmetry in both cases. Further analysis at ${\textit {Re}}=1000$ found the number of times the wake flips is dependent on the initial conditions, with a wake that flips zero (purely asymmetric), two and four times being observed. These structures were also determined to remain stable over time scales of $1000D/U$ .
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    Characteristics of a buoyant plume in a channel with cross-flow
    Cao, Y ; Philip, J ; Ooi, A (ELSEVIER SCIENCE INC, 2022-02)
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    Turbulent flow over a cylinder confined in a channel at Re=3,900
    Ooi, A ; Lu, W ; Chan, L ; Cao, Y ; Leontini, J ; Skvortsov, A (ELSEVIER SCIENCE INC, 2022-08)