School of Agriculture, Food and Ecosystem Sciences - Research Publications

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    Small artificial impoundments have big implications for hydrology and freshwater biodiversity
    Morden, R ; Horne, A ; Bond, NR ; Nathan, R ; Olden, JD (WILEY, 2022-04)
    Headwater streams are critical for freshwater ecosystems. Global and continental studies consistently show major dams as dominant sources of hydrological stress threatening biodiversity in the world’s major rivers, but cumulative impacts from small artificial impoundments (SAIs) concentrated in headwater streams have rarely been acknowledged. Using the Murray Darling River basin (Australia) and the Arkansas River basin (US) as case studies, we examined the hydrological impacts of SAIs. The extent of their influence is considerable, altering hydrology in 280–380% more waterways as compared to major dams. Hydrological impacts are concentrated in smaller streams (catchment area <100 km2), raising concerns that the often diverse and highly endemic biota found in these systems may be under threat. Adjusting existing biodiversity planning and management approaches to address the cumulative effects of many small and widely distributed artificial impoundments presents a rapidly emerging challenge for ecologically sustainable water management.
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    Using State-and-Transition Simulation Models (STSMs) to Explore Dynamic Population Responses to Drought Cycles in Freshwater Ecosystems
    Bond, NRR ; Horne, ACC ; McPhan, LMM ; Coleman, R (FRONTIERS MEDIA SA, 2022-08-22)
    Climate variability and change pose significant threats to aquatic biodiversity, particularly in areas with low and variable streamflow. Quantifying the magnitude of risk from these threats is made more difficult by the variable responses of individual species to hydrologic stress. Patterns of population decline and recovery in response to drought cycles will depend on both the resistance traits (e.g., tolerance to harsh environmental conditions) and resilience traits (e.g., fecundity, age at maturity), both of which vary considerably among species. Collectively these traits can give rise to varied, and lagged patterns of decline and recovery in response to hydrologic variability, which ultimately can affect population viability in drought prone environments and in response to a changing climate. Such population cycles are typically modelled based on demographic rates (mortality and recruitment) under different climate conditions. However, such models are relatively data intensive, limiting their widespread development. A less precise but more tractable approach is to adopt state-and-transition approaches based on semi-quantitative population states (or population size estimates), and modelled transitions between states under different hydrologic conditions. Here we demonstrate the application of such models to a suite of diverse taxa, based on an expert elicitation of expected state-changes across those different taxa under a range of different flow conditions. The model results broadly conform with population changes observed in response to a major drought in the case-study system, mimicking the observed lags in recovery of species with different life-histories. Stochastic simulations of population cycles under scenarios of more protracted drought provide a semi-quantitative measure of the potential risk to different species under each scenario, as well as highlighting the large uncertainties that can arise when taking into account stochastic (rather than deterministic) state-transitions.
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    Community-powered urban stream restoration: A vision for sustainable and resilient urban ecosystems
    Scoggins, M ; Booth, DB ; Fletcher, T ; Fork, M ; Gonzalez, A ; Hale, RL ; Hawley, RJ ; Roy, AH ; Bilger, EE ; Bond, N ; Burns, MJ ; Hopkins, KG ; Macneale, KH ; Marti, E ; McKay, SK ; Neale, MW ; Paul, MJ ; Rios-Touma, B ; Russell, KL ; Smith, RF ; Wagner, S ; Wenger, S (The University of Chicago Press, 2022-09-01)
    Urban streams can provide amenities to people living in cities, but those benefits are reduced when streams become degraded, potentially even causing harm (disease, toxic compounds, etc.). Governments and institutions invest resources to improve the values and services provided by urban streams; however, the conception, development, and implementation of such projects may not include meaningful involvement of community members and other stakeholders. Consequently, project objectives may be misaligned with community desires and needs, and projects may fail to achieve their goals. In February 2020, the 5th Symposium on Urbanization and Stream Ecology, an interdisciplinary meeting held every 3 to 5 y, met in Austin, Texas, USA, to explore new approaches to urban stream projects, including ways to maximize the full range of potential benefits by better integrating community members into project identification and decision making. The symposium included in-depth discussion about 4 nearby field case studies, participation of multidisciplinary urban stream experts from 5 continents, and input from the Austin community. Institutional barriers to community inclusion were identified and analyzed using real-world examples, both from the case studies and from the literature, which clarified disparities in power, equity, and values. Outcomes of the symposium have been aggregated into a vision that challenges the present institutional approach to urban stream management and a set of strategies to systematically address these barriers to improve restoration solutions. Integrating community members and other stakeholders throughout the urban restoration process, and a transparent decision-making process to resolve divergent objectives, can help identify appropriate goals for realizing both the ecological and social benefits of stream restoration.
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    Fragmentation of lateral connectivity and fish population dynamics in large rivers
    Stoffels, RJ ; Humphries, P ; Bond, NR ; Price, AE (Wiley, 2022-05-01)
    Abstract Lateral Hydrological Connectivity (LHC) has been extensively fragmented in river–floodplain ecosystems of the world. Uncertainties about how LHC affects fishes are great, impeding the design of effective rehabilitation strategies. Existing conceptual frameworks do not provide sufficient mechanistic detail to support the novel decision problems river managers face. We offer a framework of how LHC affects fishes in river–floodplain ecosystems that is, process‐based, integrates all life‐stages and is spatial; these features, we argue, are required to assess risks and opportunities associated with different LHC rehabilitation strategies. Within river–floodplain segments, LHC affects population processes through five ‘effect‐classes’: effects of floodplain habitat (1) and channel habitat (2); effects of material subsidies from the floodplain to the channel (3) andvice versa(4); and effects of connectivity on lateral dispersal (5). The relative influence of these effect‐classes on processes varies among species and life‐stages. At the scale of the drainage basin, inter‐segment variation in geomorphology generates a longitudinal source‐sink structure to habitat quality and quantity, pointing to a need to better understand fish metapopulation dynamics in river–floodplain ecosystems. Given the significant investment in trying to restore river–floodplain ecosystems, we highlight potentially costly and ineffective LHC management decisions. These include certain heavily engineered LHC rehabilitation strategies that do not promote critical population processes at a local scale, and at basin scales implementing strategies that do not facilitate the metapopulation processes that promote species’ persistence.
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    The politicisation of science in the Murray-Darling Basin, Australia: discussion of 'Scientific integrity, public policy and water governance'
    Stewardson, MJ ; Bond, N ; Brookes, J ; Capon, S ; Dyer, F ; Grace, M ; Frazier, P ; Hart, B ; Horne, A ; King, A ; Langton, M ; Nathan, R ; Rutherfurd, I ; Sheldon, F ; Thompson, R ; Vertessy, R ; Walker, G ; Wang, QJ ; Wassens, S ; Watts, R ; Webb, A ; Western, AW (Taylor & Francis, 2021-10-30)
    Many water scientists aim for their work to inform water policy and management, and in pursuit of this objective, they often work alongside government water agencies to ensure their research is relevant, timely and communicated effectively. A paper in this issue, examining 'Science integrity, public policy and water governance in the Murray-Darling Basin, Australia’, suggests that a large group of scientists, who work on water management in the Murray-Darling Basin (MDB) including the Basin Plan, have been subject to possible ‘administrative capture'. Specifically, it is suggested that they have advocated for policies favoured by government agencies with the objective of gaining personal benefit, such as increased research funding. We examine evidence for this claim and conclude that it is not justified. The efforts of scientists working alongside government water agencies appear to have been misinterpreted as possible administrative capture. Although unsubstantiated, this claim does indicate that the science used in basin water planning is increasingly caught up in the politics of water management. We suggest actions to improve science-policy engagement in basin planning, to promote constructive debate over contested views and avoid the over-politicisation of basin science.
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    Assessment of the causes and solutions to the significant 2018-19 fish deaths in the Lower Darling River, New South Wales, Australia
    Sheldon, F ; Barma, D ; Baumgartner, LJ ; Bond, N ; Mitrovic, SM ; Vertessy, R (CSIRO Publishing, 2022-01-01)
    In late 2018 to early 2019, three significant fish death events occurred in the Lower Darling River, Australia, with mortality estimates of millions of fish. We examined the proximate and ultimate causes of these events. We determined that not only were the conditions existing at the time a significant contributing factor, but that antecedent conditions, particularly during the period 2010–17, also contributed. The extreme hot and dry climate during 2018, extending into 2019, shaped the conditions that saw a large fish biomass, which had flourished in the Darling River and Menindee Lakes since favourable spawning conditions in 2016, isolated in weir pools, with no means of escaping upstream or downstream. Strong and persistent weir pool stratification created hypoxic conditions in the hypolimnion. A series of sudden cool changes subsequently initiated rapid and sudden mixing of the stratified waters, causing depletion of oxygen throughout the water column and resulting in the fish deaths. The events were also shaped by broader climatic, hydrological and basin management contexts that placed the Lower Darling River at risk of such fish deaths. Our observations have implications for future river management, and we make several suggestions how policy makers and river operators can minimise fish death risks into the future.
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    Basal resource quality and energy sources in three habitats of a lowland river ecosystem
    McInerney, PJ ; Holt, G ; Lester, RE ; Thompson, RM ; Robson, B ; Ryder, DS ; Bond, NR ; Baldwin, DS ; Gawne, B ; Petrie, R (WILEY, 2020-11)
    Abstract Understanding energy flow through ecosystems and among sub‐habitats is critical for understanding patterns of biodiversity and ecosystem function. It can also be of considerable applied interest in situations where managing for connectivity among habitats is important for restoring degraded ecosystems. Here, we describe patterns of basal resource quality and identify primary basal energy sources in three habitats—river channels, anabranches and wetlands—of a lowland river floodplain in the Murray River catchment, Australia during a period of disconnected surface flow. We used a combination of stable isotope and fatty acid analyses to determine which basal resources were assimilated by the backswimmer Anisops thienemanni and the Eastern mosquitofish Gambusia holbrooki and assessed food quality across the three habitats. Seston was a primary basal resource for both animals in all three habitats, but was of higher quality within floodplain habitats than in the river channel. Although floodplain seston contained higher concentrations of essential fatty acids, fatty acid profiles of animals from different habitats remained similar. Our research suggests that inundation of floodplains and subsequent reconnection to the river could be valuable to afford riverine animals the opportunity to access high quality resources, but highlights a need to quantitatively assess the transfer of essential fatty acids between trophic levels to determine how much riverine animals are in fact limited by poorer quality food resources. We demonstrate the importance of estimating the quality of organic matter fluxes into food webs, and the potential role of targeted environmental flows to re‐establish high quality energy pathways in riverine ecosystems.
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    Research priorities for natural ecosystems in a changing global climate
    Williams, SE ; Hobday, AJ ; Falconi, L ; Hero, J-M ; Holbrook, NJ ; Capon, S ; Bond, NR ; Ling, SD ; Hughes, L (WILEY, 2020-02)
    Climate change poses significant emerging risks to biodiversity, ecosystem function and associated socioecological systems. Adaptation responses must be initiated in parallel with mitigation efforts, but resources are limited. As climate risks are not distributed equally across taxa, ecosystems and processes, strategic prioritization of research that addresses stakeholder-relevant knowledge gaps will accelerate effective uptake into adaptation policy and management action. After a decade of climate change adaptation research within the Australian National Climate Change Adaptation Research Facility, we synthesize the National Adaptation Research Plans for marine, terrestrial and freshwater ecosystems. We identify the key, globally relevant priorities for ongoing research relevant to informing adaptation policy and environmental management aimed at maximizing the resilience of natural ecosystems to climate change. Informed by both global literature and an extensive stakeholder consultation across all ecosystems, sectors and regions in Australia, involving thousands of participants, we suggest 18 priority research topics based on their significance, urgency, technical and economic feasibility, existing knowledge gaps and potential for cobenefits across multiple sectors. These research priorities provide a unified guide for policymakers, funding organizations and researchers to strategically direct resources, maximize stakeholder uptake of resulting knowledge and minimize the impacts of climate change on natural ecosystems. Given the pace of climate change, it is imperative that we inform and accelerate adaptation progress in all regions around the world.
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    Reservoir to river: Quantifying fine-scale fish movements after translocation
    Carpenter-Bundhoo, L ; Butler, GL ; Espinoza, T ; Bond, NR ; Bunn, SE ; Kennard, MJ (WILEY, 2020-01)
    Abstract Translocation of individuals is a widely used tool in the conservation of threatened species. The movement behaviours of translocated individuals in their new environment are a key factor that can influence translocation success (i.e. survival and reproduction). In this study, eel‐tailed catfish (Tandanus tandanus) and Murray cod (Maccullochella peelii) movements were monitored using fine‐scale acoustic telemetry over a 5‐month period in two lowland rivers in eastern Australia. Fine‐scale movement and habitat selection were compared among translocated lacustrine and resident riverine T. tandanus and between species. We found no difference in fine‐scale movement behaviours between translocated and resident T. tandanus; however, there was some variation in movement response to environmental variation between species. In contrast, habitat selection varied not only between the two species, but also between resident and translocated T. tandanus individuals. Notably, activity was significantly lower in the first day after release compared to the remainder of the study period. Although T. tandanus translocated from a reservoir had never experienced the environmental fluctuations of a riverine system, individuals still responded in the same way as resident riverine fish, suggesting an innate behavioural response. However, this was not the case for habitat selection, where translocated individuals preferred habitats more common in their source population's lacustrine environment. The findings of this study are important in guiding future conservation efforts involving the translocation of wild‐caught fish, primarily the importance of the suitable habitat at the release site to ensure the success and persistence of translocated populations.
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    Long-term acoustic telemetry reveals limited movement of fish in an unregulated, perennial river
    Carpenter-Bundhoo, L ; Butler, GL ; Bond, NR ; Bunn, SE ; Kennard, MJ (CSIRO PUBLISHING, 2021)
    Anthropogenic changes to river flows can alter hydrological connectivity and cues necessary for the movement of fish to complete their life cycles. Quantifying flow-related movement ecology of fish and understanding how this varies between species and river systems is important for effective environmental flow management. This study aimed to determine hydroecological factors that influence fish movements in an unregulated, perennial river and to compare these findings to fish from regulated river systems. Broad-scale movements of the endangered Maccullochella ikei and Tandanus tandanus were recorded over 3 years in the unregulated, perennial Nymboida River, Australia. The limited movements both species exhibited were infrequent and over short distances. Although M. ikei movements appeared mostly unrelated to environmental changes, T. tandanus moved on flow pulse peaks and were more likely to move during the breeding season. These findings contrast with previous studies of the same or similar species in differing flow regimes, suggesting that fish in perennial, highly connected rivers may not need to move as frequently as those in more regulated or intermittent systems. Should these disparate behaviours be present in other species occurring among contrasting flow regimes, it will be challenging to define generalisable environmental flow rules to inform river management.