School of Agriculture, Food and Ecosystem Sciences - Research Publications

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    Causes, Responses, and Implications of Anthropogenic versus Natural Flow Intermittence in River Networks
    Datry, T ; Truchy, A ; Olden, JD ; Busch, MH ; Stubbington, R ; Dodds, WK ; Zipper, S ; Yu, S ; Messager, ML ; Tonkin, JD ; Kaiser, KE ; Hammond, JC ; Moody, EK ; Burrows, RM ; Sarremejane, R ; DelVecchia, AG ; Fork, ML ; Little, CJ ; Walker, RH ; Walters, AW ; Allen, D (OXFORD UNIV PRESS, 2023-01-11)
    Abstract Rivers that do not flow year-round are the predominant type of running waters on Earth. Despite a burgeoning literature on natural flow intermittence (NFI), knowledge about the hydrological causes and ecological effects of human-induced, anthropogenic flow intermittence (AFI) remains limited. NFI and AFI could generate contrasting hydrological and biological responses in rivers because of distinct underlying causes of drying and evolutionary adaptations of their biota. We first review the causes of AFI and show how different anthropogenic drivers alter the timing, frequency and duration of drying, compared with NFI. Second, we evaluate the possible differences in biodiversity responses, ecological functions, and ecosystem services between NFI and AFI. Last, we outline knowledge gaps and management needs related to AFI. Because of the distinct hydrologic characteristics and ecological impacts of AFI, ignoring the distinction between NFI and AFI could undermine management of intermittent rivers and ephemeral streams and exacerbate risks to the ecosystems and societies downstream.
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    Reconceptualizing the hyporheic zone for nonperennial rivers and streams.
    DelVecchia, AG ; Shanafield, M ; Zimmer, MA ; Busch, MH ; Krabbenhoft, CA ; Stubbington, R ; Kaiser, KE ; Burrows, RM ; Hosen, J ; Datry, T ; Kampf, SK ; Zipper, SC ; Fritz, K ; Costigan, K ; Allen, DC (University of Chicago Press, 2022-04-22)
    Nonperennial streams dominate global river networks and are increasing in occurrence across space and time. When surface flow ceases or the surface water dries, flow or moisture can be retained in the subsurface sediments of the hyporheic zone, supporting aquatic communities and ecosystem processes. However, hydrological and ecological definitions of the hyporheic zone have been developed in perennial rivers and emphasize the mixing of water and organisms, respectively, from both the surface stream and groundwater. The adaptation of such definitions to include both humid and dry unsaturated conditions could promote characterization of how hydrological and biogeochemical variability shape ecological communities within nonperennial hyporheic zones, advancing our understanding of both ecosystem structure and function in these habitats. To conceptualize hyporheic zones for nonperennial streams, we review how water sources and surface and subsurface structure influence hydrological and physicochemical conditions. We consider the extent of this zone and how biogeochemistry and ecology might vary with surface states. We then link these components to the composition of nonperennial stream communities. Next, we examine literature to identify priorities for hydrological and ecological research exploring nonperennial hyporheic zones. Lastly, by integrating hydrology, biogeochemistry, and ecology, we recommend a multidisciplinary conceptualization of the nonperennial hyporheic zone as the porous subsurface streambed sediments that shift between lotic, lentic, humid, and dry conditions in space and time to support aquatic-terrestrial biodiversity. As river drying increases in extent because of global change, we call for holistic, interdisciplinary research across the terrestrial and aquatic sciences to apply this conceptualization to characterize hyporheic zone structure and function across the full spectrum of hydrological states.
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    Resolving the Drivers of Algal Nutrient Limitation from Boreal to Arctic Lakes and Streams
    Myrstener, M ; Fork, ML ; Bergstrom, A-K ; Puts, IC ; Hauptmann, D ; Isles, PDF ; Burrows, RM ; Sponseller, RA (SPRINGER, 2022-12)
    Abstract Nutrient inputs to northern freshwaters are changing, potentially altering aquatic ecosystem functioning through effects on primary producers. Yet, while primary producer growth is sensitive to nutrient supply, it is also constrained by a suite of other factors, including light and temperature, which may play varying roles across stream and lake habitats. Here, we use bioassay results from 89 lakes and streams spanning northern boreal to Arctic Sweden to test for differences in nutrient limitation status of algal biomass along gradients in colored dissolved organic carbon (DOC), water temperature, and nutrient concentrations, and to ask whether there are distinct patterns and drivers between habitats. Single nitrogen (N) limitation or primary N-limitation with secondary phosphorus (P) limitation of algal biomass was the most common condition for streams and lakes. Average response to N-addition was a doubling in biomass; however, the degree of limitation was modulated by the distinct physical and chemical conditions in lakes versus streams and across boreal to Arctic regions. Overall, algal responses to N-addition were strongest at sites with low background concentrations of dissolved inorganic N. Low temperatures constrained biomass responses to added nutrients in lakes but had weaker effects on responses in streams. Further, DOC mediated the response of algal biomass to nutrient addition differently among lakes and streams. Stream responses were dampened at higher DOC, whereas lake responses to nutrient addition increased from low to moderate DOC but were depressed at high DOC. Our results suggest that future changes in nutrient availability, particularly N, will exert strong effects on the trophic state of northern freshwaters. However, we highlight important differences in the physical and chemical factors that shape algal responses to nutrient availability in different parts of aquatic networks, which will ultimately affect the integrated response of northern aquatic systems to ongoing environmental changes.
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    Spatial Patterns and Drivers of Nonperennial Flow Regimes in the Contiguous United States
    Hammond, JC ; Zimmer, M ; Shanafield, M ; Kaiser, K ; Godsey, SE ; Mims, MC ; Zipper, SC ; Burrows, RM ; Kampf, SK ; Dodds, W ; Jones, CN ; Krabbenhoft, CA ; Boersma, KS ; Datry, T ; Olden, JD ; Allen, GH ; Price, AN ; Costigan, K ; Hale, R ; Ward, AS ; Allen, DC (AMER GEOPHYSICAL UNION, 2021-01-28)
    Abstract Over half of global rivers and streams lack perennial flow, and understanding the distribution and drivers of their flow regimes is critical for understanding their hydrologic, biogeochemical, and ecological functions. We analyzed nonperennial flow regimes using 540 U.S. Geological Survey watersheds across the contiguous United States from 1979 to 2018. Multivariate analyses revealed regional differences in no‐flow fraction, date of first no flow, and duration of the dry‐down period, with further divergence between natural and human‐altered watersheds. Aridity was a primary driver of no‐flow metrics at the continental scale, while unique combinations of climatic, physiographic and anthropogenic drivers emerged at regional scales. Dry‐down duration showed stronger associations with nonclimate drivers compared to no‐flow fraction and timing. Although the sparse distribution of nonperennial gages limits our understanding of such streams, the watersheds examined here suggest the important role of aridity and land cover change in modulating future stream drying.
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    Zero or not? Causes and consequences of zero-flow stream gage readings
    Zimmer, MA ; Kaiser, KE ; Blaszczak, JR ; Zipper, SC ; Hammond, JC ; Fritz, KM ; Costigan, KH ; Hosen, J ; Godsey, SE ; Allen, GH ; Kampf, S ; Burrows, RM ; Krabbenhoft, CA ; Dodds, W ; Hale, R ; Olden, JD ; Shanafield, M ; DelVecchia, AG ; Ward, AS ; Mims, MC ; Datry, T ; Bogan, MT ; Boersma, KS ; Busch, MH ; Jones, CN ; Burgin, AJ ; Allen, DC (WILEY, 2020-05)
    Streamflow observations can be used to understand, predict, and contextualize hydrologic, ecological, and biogeochemical processes and conditions in streams. Stream gages are point measurements along rivers where streamflow is measured, and are often used to infer upstream watershed-scale processes. When stream gages read zero, this may indicate that the stream has fully dried; however, zero-flow readings can also be caused by a wide range of other factors. Our ability to identify whether or not a zero-flow gage reading indicates a dry fluvial system has far reaching environmental implications. Incorrect identification and interpretation by the data user can lead to hydrologic, ecological, and/or biogeochemical predictions from models and analyses. Here, we describe several causes of zero-flow gage readings: frozen surface water, flow reversals, instrument error, and natural or human-driven upstream source losses or bypass flow. For these examples, we discuss the implications of zero-flow interpretations. We also highlight additional methodss for determining flow presence, including direct observations, statistical methods, and hydrologic models, which can be applied to interpret causes of zero-flow gage readings and implications for reach- and watershed-scale dynamics. Such efforts are necessary to improve our ability to understand and predict surface flow activation, cessation, and connectivity across river networks. Developing this integrated understanding of the wide range of possible meanings of zero-flows will only attain greater importance in a more variable and changing hydrologic climate.
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    Seasonal resource limitation of heterotrophic biofilms in boreal streams
    Burrows, RM ; Laudon, H ; McKie, BG ; Sponseller, RA (WILEY, 2017-01)
    Abstract Unraveling the potentially shifting controls over microbial activity among habitats and across seasonal transitions is critical for understanding how freshwater ecosystems influence broader elemental cycles, and how these systems may respond to global changes. We used nutrient‐diffusing substrates to investigate seasonal patterns and constraints on microbial activity of biofilms in streams draining distinct landscape features of the boreal biome (forests, mires, and lakes). Microbial respiration (MR) largely mirrored spatial and temporal variation in water temperature. However, limitation by labile carbon (C) was a constraint to microbial activity during ice‐covered periods, when MR of control nutrient‐diffusing substrates fell below rates predicted from stream temperature alone. Variation in C limitation among the study streams was reflective of putative organic C availability, with C limitation of biofilms weakest in the dissolved organic C (DOC)‐rich, mire‐outlet stream and greatest in the relatively DOC‐poor, forest stream. Incidences of nutrient limitation were only observed during warmer months. Our study illustrates how variation in processes mediated by heterotrophic biofilms and seasonal shifts in resource limitation can emerge in a stream network draining a heterogeneous landscape. In addition, our results show that, for a large portion of the year, heterotrophic processes in boreal streams can be strongly limited by the availability of labile C, despite high DOC concentrations. Metabolic constraints to dissolved organic matter processing at near‐freezing temperatures, coupled with hydrological controls over the delivery of more labile organic resources to streams (e.g., soil freezing and flooding), have potentially strong influences on the productivity of boreal streams.
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    Pervasive changes in stream intermittency across the United States
    Zipper, SC ; Hammond, JC ; Shanafield, M ; Zimmer, M ; Datry, T ; Jones, CN ; Kaiser, KE ; Godsey, SE ; Burrows, RM ; Blaszczak, JR ; Busch, MH ; Price, AN ; Boersma, KS ; Ward, AS ; Costigan, K ; Allen, GH ; Krabbenhoft, CA ; Dodds, WK ; Mims, MC ; Olden, JD ; Kampf, SK ; Burgin, AJ ; Allen, DC (IOP Publishing Ltd, 2021-08)
    Abstract Non-perennial streams are widespread, critical to ecosystems and society, and the subject of ongoing policy debate. Prior large-scale research on stream intermittency has been based on long-term averages, generally using annually aggregated data to characterize a highly variable process. As a result, it is not well understood if, how, or why the hydrology of non-perennial streams is changing. Here, we investigate trends and drivers of three intermittency signatures that describe the duration, timing, and dry-down period of stream intermittency across the continental United States (CONUS). Half of gages exhibited a significant trend through time in at least one of the three intermittency signatures, and changes in no-flow duration were most pervasive (41% of gages). Changes in intermittency were substantial for many streams, and 7% of gages exhibited changes in annual no-flow duration exceeding 100 days during the study period. Distinct regional patterns of change were evident, with widespread drying in southern CONUS and wetting in northern CONUS. These patterns are correlated with changes in aridity, though drivers of spatiotemporal variability were diverse across the three intermittency signatures. While the no-flow timing and duration were strongly related to climate, dry-down period was most strongly related to watershed land use and physiography. Our results indicate that non-perennial conditions are increasing in prevalence over much of CONUS and binary classifications of ‘perennial’ and ‘non-perennial’ are not an accurate reflection of this change. Water management and policy should reflect the changing nature and diverse drivers of changing intermittency both today and in the future.
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    Sediment Respiration Pulses in Intermittent Rivers and Ephemeral Streams
    von Schiller, D ; Datry, T ; Corti, R ; Foulquier, A ; Tockner, K ; Marce, R ; Garcia-Baquero, G ; Odriozola, I ; Obrador, B ; Elosegi, A ; Mendoza-Lera, C ; Gessner, MO ; Stubbington, R ; Albarino, R ; Allen, DC ; Altermatt, F ; Arce, M ; Arnon, S ; Banas, D ; Banegas-Medina, A ; Beller, E ; Blanchette, ML ; Blanco-Libreros, JF ; Blessing, J ; Boechat, IG ; Boersma, KS ; Bogan, MT ; Bonada, N ; Bond, NR ; Brintrup, K ; Bruder, A ; Burrows, RM ; Cancellario, T ; Carlson, SM ; Cauvy-Fraunie, S ; Cid, N ; Danger, M ; de Freitas Terra, B ; Dehedin, A ; De Girolamo, AM ; del Campo, R ; Diaz-Villanueva, V ; Duerdoth, CP ; Dyer, F ; Faye, E ; Febria, C ; Figueroa, R ; Four, B ; Gafny, S ; Gomez, R ; Gomez-Gener, L ; Graca, MAS ; Guareschi, S ; Gucker, B ; Hoppeler, F ; Hwan, JL ; Kubheka, S ; Laini, A ; Langhans, SD ; Leigh, C ; Little, CJ ; Lorenz, S ; Marshall, J ; Martin, EJ ; McIntosh, A ; Meyer, E ; Milisa, M ; Mlambo, MC ; Moleon, M ; Morais, M ; Negus, P ; Niyogi, D ; Papatheodoulou, A ; Pardo, I ; Paril, P ; Pesic, V ; Piscart, C ; Polasek, M ; Rodriguez-Lozano, P ; Rolls, RJ ; Sanchez-Montoya, MM ; Savic, A ; Shumilova, O ; Steward, A ; Taleb, A ; Uzan, A ; Vander Vorste, R ; Waltham, N ; Woelfle-Erskine, C ; Zak, D ; Zarfl, C ; Zoppini, A (AMER GEOPHYSICAL UNION, 2019-10-16)
    Intermittent rivers and ephemeral streams (IRES) may represent over half the global stream network, but their contribution to respiration and carbon dioxide (CO2) emissions is largely undetermined. In particular, little is known about the variability and drivers of respiration in IRES sediments upon rewetting, which could result in large pulses of CO2. We present a global study examining sediments from 200 dry IRES reaches spanning multiple biomes. Results from standardized assays show that mean respiration increased 32-fold to 66-fold upon sediment rewetting. Structural equation modeling indicates that this response was driven by sediment texture and organic matter quantity and quality, which, in turn, were influenced by climate, land use, and riparian plant cover. Our estimates suggest that respiration pulses resulting from rewetting of IRES sediments could contribute significantly to annual CO2 emissions from the global stream network, with a single respiration pulse potentially increasing emission by 0.2–0.7%. As the spatial and temporal extent of IRES increases globally, our results highlight the importance of recognizing the influence of wetting-drying cycles on respiration and CO2 emissions in stream networks.
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    What's in a Name? Patterns, Trends, and Suggestions for Defining Non-Perennial Rivers and Streams
    Busch, MH ; Costigan, KH ; Fritz, KM ; Datry, T ; Krabbenhoft, CA ; Hammond, JC ; Zimmer, M ; Olden, JD ; Burrows, RM ; Dodds, WK ; Boersma, KS ; Shanafield, M ; Kampf, SK ; Mims, MC ; Bogan, MT ; Ward, AS ; Rocha, MP ; Godsey, S ; Allen, GH ; Blaszczak, JR ; Jones, CN ; Allen, DC (MDPI, 2020-07)
    Rivers that cease to flow are globally prevalent. Although many epithets have been used for these rivers, a consensus on terminology has not yet been reached. Doing so would facilitate a marked increase in interdisciplinary interest as well as critical need for clear regulations. Here we reviewed literature from Web of Science database searches of 12 epithets to learn (Objective 1-O1) if epithet topics are consistent across Web of Science categories using latent Dirichlet allocation topic modeling. We also analyzed publication rates and topics over time to (O2) assess changes in epithet use. We compiled literature definitions to (O3) identify how epithets have been delineated and, lastly, suggest universal terms and definitions. We found a lack of consensus in epithet use between and among various fields. We also found that epithet usage has changed over time, as research focus has shifted from description to modeling. We conclude that multiple epithets are redundant. We offer specific definitions for three epithets (non-perennial, intermittent, and ephemeral) to guide consensus on epithet use. Limiting the number of epithets used in non-perennial river research can facilitate more effective communication among research fields and provide clear guidelines for writing regulatory documents.
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    Simulating rewetting events in intermittent rivers and ephemeral streams: A global analysis of leached nutrients and organic matter
    Shumilova, O ; Zak, D ; Datry, T ; von Schiller, D ; Corti, R ; Foulquier, A ; Obrador, B ; Tockner, K ; Allan, DC ; Altermatt, F ; Isabel Arce, M ; Arnon, S ; Banas, D ; Banegas-Medina, A ; Beller, E ; Blanchette, ML ; Blanco-Libreros, JF ; Blessing, J ; Boechat, IG ; Boersma, K ; Bogan, MT ; Bonada, N ; Bond, NR ; Brintrup, K ; Bruder, A ; Burrows, R ; Cancellario, T ; Carlson, SM ; Cauvy-Fraunie, S ; Cid, N ; Danger, M ; de Freitas Terra, B ; De Girolamo, AM ; del Campo, R ; Dyer, F ; Elosegi, A ; Faye, E ; Febria, C ; Figueroa, R ; Four, B ; Gessner, MO ; Gnohossou, P ; Cerezo, RG ; Gomez-Gener, L ; Graca, MAS ; Guareschi, S ; Guecker, B ; Hwan, JL ; Kubheka, S ; Langhans, SD ; Leigh, C ; Little, CJ ; Lorenz, S ; Marshall, J ; McIntosh, A ; Mendoza-Lera, C ; Meyer, EI ; Milisa, M ; Mlambo, MC ; Moleon, M ; Negus, P ; Niyogi, D ; Papatheodoulou, A ; Pardo, I ; Paril, P ; Pesic, V ; Rodriguez-Lozano, P ; Rolls, RJ ; Sanchez-Montoya, MM ; Savic, A ; Steward, A ; Stubbington, R ; Taleb, A ; Vander Vorste, R ; Waltham, N ; Zoppini, A ; Zarfl, C (WILEY, 2019-05-01)
    Climate change and human pressures are changing the global distribution and the extent of intermittent rivers and ephemeral streams (IRES), which comprise half of the global river network area. IRES are characterized by periods of flow cessation, during which channel substrates accumulate and undergo physico-chemical changes (preconditioning), and periods of flow resumption, when these substrates are rewetted and release pulses of dissolved nutrients and organic matter (OM). However, there are no estimates of the amounts and quality of leached substances, nor is there information on the underlying environmental constraints operating at the global scale. We experimentally simulated, under standard laboratory conditions, rewetting of leaves, riverbed sediments, and epilithic biofilms collected during the dry phase across 205 IRES from five major climate zones. We determined the amounts and qualitative characteristics of the leached nutrients and OM, and estimated their areal fluxes from riverbeds. In addition, we evaluated the variance in leachate characteristics in relation to selected environmental variables and substrate characteristics. We found that sediments, due to their large quantities within riverbeds, contribute most to the overall flux of dissolved substances during rewetting events (56%–98%), and that flux rates distinctly differ among climate zones. Dissolved organic carbon, phenolics, and nitrate contributed most to the areal fluxes. The largest amounts of leached substances were found in the continental climate zone, coinciding with the lowest potential bioavailability of the leached OM. The opposite pattern was found in the arid zone. Environmental variables expected to be modified under climate change (i.e. potential evapotranspiration, aridity, dry period duration, land use) were correlated with the amount of leached substances, with the strongest relationship found for sediments. These results show that the role of IRES should be accounted for in global biogeochemical cycles, especially because prevalence of IRES will increase due to increasing severity of drying events.