School of Agriculture, Food and Ecosystem Sciences - Research Publications
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ItemRats and the city: Implications of urbanization on zoonotic disease risk in Southeast Asia(NATL ACAD SCIENCES, 2022-09-27)Urbanization is rapidly transforming much of Southeast Asia, altering the structure and function of the landscape, as well as the frequency and intensity of the interactions between people, animals, and the environment. In this study, we explored the impact of urbanization on zoonotic disease risk by simultaneously characterizing changes in the ecology of animal reservoirs (rodents), ectoparasite vectors (ticks), and pathogens across a gradient of urbanization in Kuching, a city in Malaysian Borneo. We sampled 863 rodents across rural, developing, and urban locations and found that rodent species diversity decreased with increasing urbanization-from 10 species in the rural location to 4 in the rural location. Notably, two species appeared to thrive in urban areas, as follows: the invasive urban exploiter Rattus rattus (n = 375) and the native urban adapter Sundamys muelleri (n = 331). R. rattus was strongly associated with built infrastructure across the gradient and carried a high diversity of pathogens, including multihost zoonoses capable of environmental transmission (e.g., Leptospira spp.). In contrast, S. muelleri was restricted to green patches where it was found at high densities and was strongly associated with the presence of ticks, including the medically important genera Amblyomma, Haemaphysalis, and Ixodes. Our analyses reveal that zoonotic disease risk is elevated and heterogeneously distributed in urban environments and highlight the potential for targeted risk reduction through pest management and public health messaging.
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ItemConnecting Biodiversity With Mental Health and Wellbeing - A Review of Methods and Disciplinary Perspectives(FRONTIERS MEDIA SA, 2022-05-24)Biodiversity conservation and mental health and wellbeing are of increasing global concern, with growing relevance to planning and policy. A growing body of literature exploring the relationships between biodiversity and mental health and wellbeing—based on early research conducted largely from social science perspectives—suggests that particular qualities within natural environments confer particular benefits. Results so far have been inconclusive and inconsistent, contributing to an incohesive body of evidence. While past reviews have focused on reporting variations in results, the present study builds on early reviews by exploring variations from the perspective of author disciplines and the use of different guiding theories, and variables used to measure biodiversity, mental health and wellbeing. This aims to address a research gap in understanding whether research in this topic has become more interdisciplinary or has employed more consistent study designs, which were highlighted as priorities in past reviews, but the progress of which has not yet been explored in depth. We found that research connecting biodiversity and mental health and wellbeing has become only marginally more interdisciplinary in recent years, and there is still a large inconsistency in the use of guiding theories, variables and overall study designs. The variation in disciplinary perspectives and methods reflects a growing interest in this field and the variety of ways researchers are trying to understand and test the complex relationships between biodiversity and mental health and wellbeing. Our study shows that there are unique perspectives that different disciplines can contribute to this body of research and continuing to increase collaboration between disciplines with the use of consistent mixed methods approaches in future may contribute to a more cohesive body of evidence. We provide a framework to conceptualize recommendations for future research, highlighting the importance of interdisciplinary collaboration at multiple scales, and importantly focusing on more specific, mechanistic studies to inform decision-making that provides co-benefits for biodiversity and mental health and wellbeing.
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ItemNo Preview AvailableA global horizon scan of the future impacts of robotics and autonomous systems on urban ecosystems(NATURE PORTFOLIO, 2021-02)Technology is transforming societies worldwide. A major innovation is the emergence of robotics and autonomous systems (RAS), which have the potential to revolutionize cities for both people and nature. Nonetheless, the opportunities and challenges associated with RAS for urban ecosystems have yet to be considered systematically. Here, we report the findings of an online horizon scan involving 170 expert participants from 35 countries. We conclude that RAS are likely to transform land use, transport systems and human-nature interactions. The prioritized opportunities were primarily centred on the deployment of RAS for the monitoring and management of biodiversity and ecosystems. Fewer challenges were prioritized. Those that were emphasized concerns surrounding waste from unrecovered RAS, and the quality and interpretation of RAS-collected data. Although the future impacts of RAS for urban ecosystems are difficult to predict, examining potentially important developments early is essential if we are to avoid detrimental consequences but fully realize the benefits.
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ItemUrban forest invertebrates: how they shape and respond to the urban environment(SPRINGER, 2022-12)Abstract Invertebrates comprise the most diversified animal group on Earth. Due to their long evolutionary history and small size, invertebrates occupy a remarkable range of ecological niches, and play an important role as “ecosystem engineers” by structuring networks of mutualistic and antagonistic ecological interactions in almost all terrestrial ecosystems. Urban forests provide critical ecosystem services to humans, and, as in other systems, invertebrates are central to structuring and maintaining the functioning of urban forests. Identifying the role of invertebrates in urban forests can help elucidate their importance to practitioners and the public, not only to preserve biodiversity in urban environments, but also to make the public aware of their functional importance in maintaining healthy greenspaces. In this review, we examine the multiple functional roles that invertebrates play in urban forests that contribute to ecosystem service provisioning, including pollination, predation, herbivory, seed and microorganism dispersal and organic matter decomposition, but also those that lead to disservices, primarily from a public health perspective, e.g., transmission of invertebrate-borne diseases. We then identify a number of ecological filters that structure urban forest invertebrate communities, such as changes in habitat structure, increased landscape imperviousness, microclimatic changes and pollution. We also discuss the complexity of ways that forest invertebrates respond to urbanisation, including acclimation, local extinction and evolution. Finally, we present management recommendations to support and conserve viable and diverse urban forest invertebrate populations into the future.
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ItemAusTraits, a curated plant trait database for the Australian flora(NATURE PORTFOLIO, 2021-09-30)We introduce the AusTraits database - a compilation of values of plant traits for taxa in the Australian flora (hereafter AusTraits). AusTraits synthesises data on 448 traits across 28,640 taxa from field campaigns, published literature, taxonomic monographs, and individual taxon descriptions. Traits vary in scope from physiological measures of performance (e.g. photosynthetic gas exchange, water-use efficiency) to morphological attributes (e.g. leaf area, seed mass, plant height) which link to aspects of ecological variation. AusTraits contains curated and harmonised individual- and species-level measurements coupled to, where available, contextual information on site properties and experimental conditions. This article provides information on version 3.0.2 of AusTraits which contains data for 997,808 trait-by-taxon combinations. We envision AusTraits as an ongoing collaborative initiative for easily archiving and sharing trait data, which also provides a template for other national or regional initiatives globally to fill persistent gaps in trait knowledge.
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ItemHierarchical filters determine community assembly of urban species pools(WILEY, 2016-11)The majority of humanity now lives in cities or towns, with this proportion expected to continue increasing for the foreseeable future. As novel ecosystems, urban areas offer an ideal opportunity to examine multi-scalar processes involved in community assembly as well as the role of human activities in modulating environmental drivers of biodiversity. Although ecologists have made great strides in recent decades at documenting ecological relationships in urban areas, much remains unknown, and we still need to identify the major ecological factors, aside from habitat loss, behind the persistence or extinction of species and guilds of species in cities. Given this paucity of knowledge, there is an immediate need to facilitate collaborative, interdisciplinary research on the patterns and drivers of biodiversity in cities at multiple spatial scales. In this review, we introduce a new conceptual framework for understanding the filtering processes that mold diversity of urban floras and faunas. We hypothesize that the following hierarchical series of filters influence species distributions in cities: (1) regional climatic and biogeographical factors; (2) human facilitation; (3) urban form and development history; (4) socioeconomic and cultural factors; and (5) species interactions. In addition to these filters, life history and functional traits of species are important in determining community assembly and act at multiple spatial scales. Using these filters as a conceptual framework can help frame future research needed to elucidate processes of community assembly in urban areas. Understanding how humans influence community structure and processes will aid in the management, design, and planning of our cities to best support biodiversity.
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ItemMoving beyond biotic homogenization: searching for new insights into vegetation dynamics(WILEY, 2016-05)Abstract Biotic homogenization has been predicted to occur in cities across the world. However, the empirical evidence has been less than convincing. Lososová et al. explore the middle ground between these two points of view in this issue of Journal of Vegetation Science. They take a more sophisticated approach, linking homogenization to bigger questions of vegetation assembly in urban environments.
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ItemDynamic Changes in Melbourne's Urban Vegetation Cover-2001 to 2016(MDPI, 2021-08)Understanding changes in urban vegetation is essential for ensuring sustainable and healthy cities, mitigating disturbances due to climate change, sustaining urban biodiversity, and supporting human health and wellbeing. This study investigates and describes the distribution and dynamic changes in urban vegetation over a 15-year period in Greater Melbourne, Australia. The study investigates how vegetation cover across Melbourne has changed at five-yearly intervals from 2001 to 2016 using the newly proposed dynamic change approach that extends the net change approach to quantify the amount of vegetation gain as well as loss. We examine this question at two spatial resolutions: (1) at the municipal landscape scale to capture broadscale change regardless of land tenure; and (2) at the scale of designated public open spaces within the municipalities to investigate the extent to which the loss of vegetation has occurred on lands that are intended to provide public access to vegetated areas in the city. Vegetation was quantified at four different times (2001, 2006, 2011, 2016), using the normalized difference vegetation index (NDVI). Dynamic changes of gain and loss in urban vegetation between the three periods were quantified for six local government areas (LGAs) and their associated public open spaces using a change matrix. The results showed an overall net loss of 64.5 square kilometres of urban vegetation from 2001 to 2016 in six LGAs. When extrapolated to the Greater Melbourne Area, this is approximately equivalent to 109 times the size of Central Park in New York City.
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ItemComposition of the soil seed bank in remnant patches of grassy woodland along an urbanization gradient in Melbourne, Australia(SPRINGER, 2013-10)Urban areas around the world are rapidly expanding, with flow-on consequences for the native plants and animals that inhabit these areas. The impacts of this urban growth are not always immediate, and in the case of the local extinction of plant species may take up to 100–150� years. Understanding how urbanization affects ecological patterns and processes may allow us to minimize the loss of species from these areas through better planning and conservation decisions. This study examined the composition of the soil seed bank in remnant patches of grassy woodland along an urbanization gradient in northern Melbourne, Australia, using an ex-situ glasshouse germination trial. A total of 108 species emerged from the soil seed bank, although a majority of the seedlings were seeds from 19 non-indigenous monocot species. Species richness per plot of emergent seedlings was best explained by average annual rainfall, rather than the degree of urbanization in the surrounding landscape. This indicates that the existing plant community may be responding to a natural productivity gradient. The persistence of 123 indigenous plant species in the existing vegetation, even when the soil seed bank is dominated by non-indigenous monocot species, suggests that these plant communities can exist within urban areas, particularly in combination with appropriate management activities that ensure the continuation of previously occurring natural processes.
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