School of Agriculture, Food and Ecosystem Sciences - Research Publications

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    Higher plant colonisation and lower resident diversity in grasslands more recently abandoned from agriculture
    Catford, JA ; Shepherd, HER ; Tennant, P ; Tilman, D (WILEY, 2023-11)
    Abstract Rates of species colonisation and extirpation are increasing in plant communities world‐wide. Colonisation could potentially help compensate for, or compound, resident diversity loss that results from global environmental change. We use a multifactorial seed addition grassland experiment to examine relationships between plant colonisation, resident species diversity and key community assembly factors over 3 years. By manipulating colonist seed rate, imposing disturbance and examining abundance and diversity impacts of 14 formerly absent sown colonists in communities that varied in successional stage and time since agricultural abandonment, we were able to disentangle effects of global change factors (species introduction, novel disturbance and land use change) that are usually confounded. Evidence suggested that cover abundance of sown colonists was most strongly influenced by successional stage of recipient communities, though number of growing seasons was also important for the group of seven colonists with resource conservative ‘slow’ life history traits. Colonist type, seed rate and disturbance had weaker relationships with colonist cover. Factors affecting sown colonist cover were highly conditional. A negative relationship between plot‐level disturbance and colonist cover in early successional communities meant that, despite a positive relationship in late succession, colonisation was negatively related to disturbance overall, defying theoretical expectations. Non‐sown resident diversity was negatively related to colonist cover and positively related to successional stage. Resource acquisitive colonists with ‘fast’ life history traits appeared to limit cover of ‘slow colonists’ when the two groups were sown together, likely reflecting niche pre‐emption. Communities at earlier stages of succession had lower resident diversity and experienced higher levels of colonisation than communities at later stages of succession. Elevated colonisation and lower resident diversity both appeared to be symptoms of human‐induced land use change. However, results suggested that resource competition from plant colonists may also limit resident diversity in grasslands abandoned from agriculture more recently. Synthesis. Our findings point to the importance of resource availability and competition on plant colonisation and colonist impacts on residents. Although colonisation is potentially a source of biodiversity in the short term, our results suggest that plant colonists that reach high abundance may be a further threat to resident plant diversity in secondary grasslands recovering from a recent history of agriculture.
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    A mechanistic framework of enemy release
    Brian, JI ; Catford, JA (WILEY, 2023-12)
    The enemy release hypothesis (ERH) is the best-known hypothesis explaining high performance (e.g. rapid population growth) of exotic species. However, the current framing of the ERH does not explicitly link evidence of enemy release with exotic performance. This leads to uncertainty regarding the role of enemy release in biological invasions. Here, we demonstrate that the effect of enemy release on exotic performance is the product of three factors: enemy impact, enemy diversity, and host adaptation. These factors are modulated by seven contexts: time since introduction, resource availability, phylogenetic relatedness of exotic and native species, host-enemy asynchronicity, number of introduction events, type of enemy, and strength of growth-defence trade-offs. ERH-focused studies frequently test different factors under different contexts. This can lead to inconsistent findings, which typifies current evidence for the ERH. For example, over 80% of meta-analyses fail to consider ecological contexts which can alter study findings; we demonstrate this by re-analysing a recent ERH synthesis. Structuring the ERH around factors and contexts promotes generalisable predictions about when and where exotic species may benefit from enemy release, empowering effective management. Our mechanistic factor-context framework clearly lays out the evidence required to support the ERH, unifies many enemy-related invasion hypotheses, and enhances predictive capacity.
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    Niche partitioning overrides interspecific competition to determine plant species distributions along a nutrient gradient
    Wandrag, EM ; Catford, JA ; Duncan, RP (WILEY, 2023-02-01)
    Changes in some combination of niche availability, niche overlap and the strength of interspecific interactions are thought to drive changes in plant composition along resource gradients. However, because these processes are difficult to measure in the field, their relative importance in driving compositional change in plant communities remains unclear. In an Australian temperate grassland, we added seeds of three native and three exotic grasses to 1875 experimental plots in a way that allowed us to simultaneously estimate niche availability, niche overlap and the strength of pairwise interspecific interactions along a gradient of nutrient availability, obtained by adding 0, 5 or 20 g m−2 each of nitrogen, phosphorous and potassium jointly to plots. Niche availability (the proportion of microsites suitable for establishment and growth) was generally low and did not vary in response to nutrient addition. Most species co‐occurred along the nutrient gradient by partitioning the available niche space. Where species interacted due to niche overlap, the abundance of one species, the native Chloris truncata, was usually facilitated by other species, with each of the five other species increasing the niche availability to C. truncata under at least one nutrient treatment. Chloris truncata also competitively excluded two species from some but not all sites they could otherwise have occupied. These outcomes did not clearly differ across nutrient treatments. Our results show that fine‐scale spatial heterogeneity in establishment microsites can enable species to co‐occur via niche partitioning, and competitive exclusion is rare. This finding contributes to an emerging picture that niche partitioning is common and frequently a stronger influence on recruitment outcomes than interspecific competition. The importance of competition in structuring plant communities may be overestimated if recruitment processes are overlooked.
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    High exposure of global tree diversity to human pressure
    Guo, W-Y ; Serra-Diaz, JM ; Schrodt, F ; Eiserhardt, WL ; Maitner, BS ; Merow, C ; Violle, C ; Anand, M ; Belluau, M ; Bruun, HH ; Byun, C ; Catford, JA ; Cerabolini, BEL ; Chacon-Madrigal, E ; Ciccarelli, D ; Cornelissen, JHC ; Dang-Le, AT ; de Frutos, A ; Dias, AS ; Giroldo, AB ; Guo, K ; Gutierrez, AG ; Hattingh, W ; He, T ; Hietz, P ; Hough-Snee, N ; Jansen, S ; Kattge, J ; Klein, T ; Komac, B ; Kraft, NJB ; Kramer, K ; Lavorel, S ; Lusk, CH ; Martin, AR ; Mencuccini, M ; Michaletz, ST ; Minden, V ; Mori, AS ; Niinemets, U ; Onoda, Y ; Penuelas, J ; Pillar, VD ; Pisek, J ; Robroek, BJM ; Schamp, B ; Slot, M ; Sosinski, EE ; Soudzilovskaia, NA ; Thiffault, N ; van Bodegom, P ; van der Plas, F ; Wright, IJ ; Xu, W-B ; Zheng, J ; Enquist, BJ ; Svenning, J-C (NATL ACAD SCIENCES, 2022-06-21)
    Safeguarding Earth's tree diversity is a conservation priority due to the importance of trees for biodiversity and ecosystem functions and services such as carbon sequestration. Here, we improve the foundation for effective conservation of global tree diversity by analyzing a recently developed database of tree species covering 46,752 species. We quantify range protection and anthropogenic pressures for each species and develop conservation priorities across taxonomic, phylogenetic, and functional diversity dimensions. We also assess the effectiveness of several influential proposed conservation prioritization frameworks to protect the top 17% and top 50% of tree priority areas. We find that an average of 50.2% of a tree species' range occurs in 110-km grid cells without any protected areas (PAs), with 6,377 small-range tree species fully unprotected, and that 83% of tree species experience nonnegligible human pressure across their range on average. Protecting high-priority areas for the top 17% and 50% priority thresholds would increase the average protected proportion of each tree species' range to 65.5% and 82.6%, respectively, leaving many fewer species (2,151 and 2,010) completely unprotected. The priority areas identified for trees match well to the Global 200 Ecoregions framework, revealing that priority areas for trees would in large part also optimize protection for terrestrial biodiversity overall. Based on range estimates for >46,000 tree species, our findings show that a large proportion of tree species receive limited protection by current PAs and are under substantial human pressure. Improved protection of biodiversity overall would also strongly benefit global tree diversity.
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    Building trait datasets: effect of methodological choice on a study of invasion
    Palma, E ; Vesk, PA ; Catford, JA (SPRINGER, 2022-08)
    Trait-based approaches are commonly used to understand ecological phenomena and processes. Trait data are typically gathered by measuring local specimens, retrieving published records, or a combination of the two. Implications of methodological choices in trait-based ecological studies-including source of data, imputation technique, and species selection criteria-are poorly understood. We ask: do different approaches for dataset-building lead to meaningful differences in trait datasets? If so, do these differences influence findings of a trait-based examination of plant invasiveness, measured as abundance and spread rate? We collected on-site (Victoria, Australia) and off-site (TRY database) height and specific leaf area records for as many species as possible out of 157 exotic herbaceous plants. For each trait, we built six datasets of species-level means using records collected on-site, off-site, on-site and off-site combined, and off-site supplemented via imputation based on phylogeny and/or trait correlations. For both traits, the six datasets were weakly correlated (ρ = 0.31-0.95 for height; ρ = 0.14-0.88 for SLA), reflecting differences in species' trait values from the various estimations. Inconsistencies in species' trait means across datasets did not translate into large differences in trait-invasion relationships. Although we did not find that methodological choices for building trait datasets greatly affected ecological inference about local invasion processes, we nevertheless recommend: (1) using on-site records to answer local-scale ecological questions whenever possible, and (2) transparency around methodological decisions related to selection of study species and estimation of missing trait values.
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    Restored river-floodplain connectivity promotes woody plant establishment
    Fischer, S ; Greet, J ; Walsh, CJ ; Catford, JA (ELSEVIER, 2021-08-01)
    Riparian forest ecosystems are declining globally. Many floodplains no longer flood and thus cease to satisfy the hydrologic requirements for riparian tree maintenance and regeneration. To promote woody riparian plant recruitment where flood regimes have been altered by flow regulation, effective approaches to restoration need to be developed. We implemented a landscape-scale experiment in a remnant, temperate floodplain forest. By constructing two weirs within channelized reaches of a stream, we redirected flows into networks of historic distributary channels, which facilitated widespread floodplain inundation. Using a control-reference-impact study design, we assessed the establishment and growth of planted seedlings of three woody species (Eucalyptus camphora, Leptospermum lanigerum and Melaleuca squarrosa) over 13 months in response to flooding achieved by floodplain reconnection. Planted seedlings had higher height and diameter growth rates at both induced (19–29 cm, 1 mm) and naturally flooded (34–44 cm, 3–5 mm) than at non-flooded (4–10 cm, −5 to −3 mm) sites. However, survival rates and temporal growth patterns differed between species according to variation in flood duration and soil moisture, illustrating the different hydrological requirements of the coexisting species. This highlights that variable flooding and drying patterns are essential to create recruitment niches for different riparian plant species and shows the importance of river-floodplain connectivity for providing adequate flooding regimes. Our study demonstrates the suitability of two complementary restoration approaches – restoring hydrology and active revegetation – for promoting the regeneration of riparian forests.
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    Restored river-floodplain connectivity promotes riparian tree maintenance and recruitment
    Greet, J ; Fischer, S ; Walsh, CJ ; Sammonds, MJ ; Catford, JA (ELSEVIER, 2022-02-15)
    Riparian forest loss and degradation due to river-floodplain disconnection is a global problem. Prospects for the maintenance and recruitment of riparian trees via restored flooding can be uncertain, in part due to competition from understorey vegetation and limited availability of tree propagules. In a field-based trial, we assessed the response of a keystone riparian tree to restored flooding, reduced competition and seed addition. We built diversion weirs to reconnect floodplains supporting riparian forest. Using a multiple control-intervention-reference study design with two restored flooding (intervention) sites, two naturally-engaged (reference) and two dry (control) sites, we assessed seedling recruitment of the dominant tree, Eucalyptus camphora, with and without clearance of understorey vegetation and with and without seed addition. We also assessed the growth of extant trees using dendrometers and seedfall using funnel traps at all six sites. Our weirs resulted in extensive flooding of the adjacent floodplain, while control sites remained dry. Flooding increased seed germination, seedling establishment, tree growth and seedfall. However, seed germination benefits were only realised where understorey vegetation was cleared and seed was added. Seedling establishment was also limited by dry summer conditions, except where flooding duration was longest (∼6 months cf. < 3 months). Restored flooding via river-floodplain reconnection is likely to promote the rehabilitation of riparian forests degraded by flow regulation or stream modification through benefits at multiple tree life-history stages. However, widespread tree recruitment may require complementary works that reduce competition via clearing of understorey vegetation and alleviate seed limitation by direct seeding or planting.
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    Riparian trees resprout regardless of timing and severity of disturbance by coppicing
    Fischer, S ; Greet, J ; Walsh, CJ ; Catford, JA ; Arndt, SK (ELSEVIER, 2022-03-01)
    Human modification of waterways has reduced flooding in many river systems, leading to the decline of riparian forests, which rely on flooding for their regeneration. Coppicing may help to promote the persistence of riparian trees by triggering resprouting and vegetative regeneration. The vigour of resprouting plants can vary with timing and height of coppicing and may depend on stored non-structural carbohydrate reserves like starch, the availability of which can vary seasonally. However, starch storage dynamics and the resprouting potential of broad-leafed evergreen riparian trees is not well understood. We coppiced two riparian tree species, Eucalyptus camphora and Melaleuca squarrosa, at two different times (autumn, spring) and at two different heights (0 cm and 90 cm). Over 52 weeks, we regularly quantified shoot growth and changes in the starch storage pool size, compared to uncoppiced control trees, in different tree organs (root and stem) and estimated the final shoot volume. The final shoot volume did not differ significantly between coppice treatments. Trees coppiced in autumn had a greater reliance on stored starch while they remained leafless (without shoots) over winter. Trees cut at 90 cm had more starch reserves due to remaining stems but also had higher biomass maintenance costs. Starch storage varied seasonally only in E. camphora, with starch concentrations in control trees increasing over winter and decreasing over summer. Although coppice timing and height affected use of stored starch, resprouting in our study species was not limited by starch availability - both species regenerated vegetatively to recover from physical disturbance. Thus, coppicing may be an efficient means to promote rejuvenation and persistence of tree species where site and tree condition are degraded and no longer support recruitment.
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    AusTraits, a curated plant trait database for the Australian flora
    Falster, D ; Gallagher, R ; Wenk, EH ; Wright, IJ ; Indiarto, D ; Andrew, SC ; Baxter, C ; Lawson, J ; Allen, S ; Fuchs, A ; Monro, A ; Kar, F ; Adams, MA ; Ahrens, CW ; Alfonzetti, M ; Angevin, T ; Apgaua, DMG ; Arndt, S ; Atkin, OK ; Atkinson, J ; Auld, T ; Baker, A ; von Balthazar, M ; Bean, A ; Blackman, CJ ; Bloomfeld, K ; Bowman, DMJS ; Bragg, J ; Brodribb, TJ ; Buckton, G ; Burrows, G ; Caldwell, E ; Camac, J ; Carpenter, R ; Catford, J ; Cawthray, GR ; Cernusak, LA ; Chandler, G ; Chapman, AR ; Cheal, D ; Cheesman, AW ; Chen, S-C ; Choat, B ; Clinton, B ; Clode, PL ; Coleman, H ; Cornwell, WK ; Cosgrove, M ; Crisp, M ; Cross, E ; Crous, KY ; Cunningham, S ; Curran, T ; Curtis, E ; Daws, M ; DeGabriel, JL ; Denton, MD ; Dong, N ; Du, P ; Duan, H ; Duncan, DH ; Duncan, RP ; Duretto, M ; Dwyer, JM ; Edwards, C ; Esperon-Rodriguez, M ; Evans, JR ; Everingham, SE ; Farrell, C ; Firn, J ; Fonseca, CR ; French, BJ ; Frood, D ; Funk, JL ; Geange, SR ; Ghannoum, O ; Gleason, SM ; Gosper, CR ; Gray, E ; Groom, PK ; Grootemaat, S ; Gross, C ; Guerin, G ; Guja, L ; Hahs, AK ; Harrison, MT ; Hayes, PE ; Henery, M ; Hochuli, D ; Howell, J ; Huang, G ; Hughes, L ; Huisman, J ; Ilic, J ; Jagdish, A ; Jin, D ; Jordan, G ; Jurado, E ; Kanowski, J ; Kasel, S ; Kellermann, J ; Kenny, B ; Kohout, M ; Kooyman, RM ; Kotowska, MM ; Lai, HR ; Laliberte, E ; Lambers, H ; Lamont, BB ; Lanfear, R ; van Langevelde, F ; Laughlin, DC ; Laugier-kitchener, B-A ; Laurance, S ; Lehmann, CER ; Leigh, A ; Leishman, MR ; Lenz, T ; Lepschi, B ; Lewis, JD ; Lim, F ; Liu, U ; Lord, J ; Lusk, CH ; Macinnis-Ng, C ; McPherson, H ; Magallon, S ; Manea, A ; Lopez-Martinez, A ; Mayfeld, M ; McCarthy, JK ; Meers, T ; van der Merwe, M ; Metcalfe, DJ ; Milberg, P ; Mokany, K ; Moles, AT ; Moore, BD ; Moore, N ; Morgan, JW ; Morris, W ; Muir, A ; Munroe, S ; Nicholson, A ; Nicolle, D ; Nicotra, AB ; Niinemets, U ; North, T ; O'Reilly-Nugent, A ; O'Sullivan, OS ; Oberle, B ; Onoda, Y ; Ooi, MKJ ; Osborne, CP ; Paczkowska, G ; Pekin, B ; Pereira, CG ; Pickering, C ; Pickup, M ; Pollock, LJ ; Poot, P ; Powell, JR ; Power, S ; Prentice, IC ; Prior, L ; Prober, SM ; Read, J ; Reynolds, V ; Richards, AE ; Richardson, B ; Roderick, ML ; Rosell, JA ; Rossetto, M ; Rye, B ; Rymer, PD ; Sams, M ; Sanson, G ; Sauquet, H ; Schmidt, S ; Schoenenberger, J ; Schulze, E-D ; Sendall, K ; Sinclair, S ; Smith, B ; Smith, R ; Soper, F ; Sparrow, B ; Standish, RJ ; Staples, TL ; Stephens, R ; Szota, C ; Taseski, G ; Tasker, E ; Thomas, F ; Tissue, DT ; Tjoelker, MG ; Tng, DYP ; de Tombeur, F ; Tomlinson, K ; Turner, NC ; Veneklaas, EJ ; Venn, S ; Vesk, P ; Vlasveld, C ; Vorontsova, MS ; Warren, CA ; Warwick, N ; Weerasinghe, LK ; Wells, J ; Westoby, M ; White, M ; Williams, NSG ; Wills, J ; Wilson, PG ; Yates, C ; Zanne, AE ; Zemunik, G ; Zieminska, K (NATURE PORTFOLIO, 2021-09-30)
    We introduce the AusTraits database - a compilation of values of plant traits for taxa in the Australian flora (hereafter AusTraits). AusTraits synthesises data on 448 traits across 28,640 taxa from field campaigns, published literature, taxonomic monographs, and individual taxon descriptions. Traits vary in scope from physiological measures of performance (e.g. photosynthetic gas exchange, water-use efficiency) to morphological attributes (e.g. leaf area, seed mass, plant height) which link to aspects of ecological variation. AusTraits contains curated and harmonised individual- and species-level measurements coupled to, where available, contextual information on site properties and experimental conditions. This article provides information on version 3.0.2 of AusTraits which contains data for 997,808 trait-by-taxon combinations. We envision AusTraits as an ongoing collaborative initiative for easily archiving and sharing trait data, which also provides a template for other national or regional initiatives globally to fill persistent gaps in trait knowledge.
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    Disentangling the four demographic dimensions of species invasiveness
    Catford, JA ; Baumgartner, JB ; Vesk, PA ; White, M ; Buckley, YM ; McCarthy, MA ; Alpert, P (WILEY, 2016-11)
    A definitive list of invasive species traits remains elusive, perhaps due to inconsistent ways of identifying invasive species. Invasive species are typically identified using one or more of four demographic criteria (local abundance, geographic range, environmental range, spread rate), referred to here as the demographic dimensions of invasiveness. In 112 studies comparing invasive and non‐invasive plant traits, all 15 combinations of the four demographic dimensions were used to identify invasive species; 22% of studies identified invasive species solely by high abundance, while 25% ignored abundance. We used demographic data of 340 alien herbs classified as invasive or non‐invasive in Victoria, Australia, to test whether the demographic dimensions are independent and which dimensions influence invasive species listing in practice. Species' abundances, spread rates and range sizes were independent. Relative abundance best explained the invasiveness classification. However, invasive and non‐invasive species each spanned the full range of each demographic dimension, indicating that no dimension clearly separates invasive from non‐invasive species. Graminoids with longer minimum residence times were more frequently classified as invasive, as were forbs occurring near edges of native vegetation fragments. Synthesis. Conflating multiple forms of invasiveness, by not distinguishing invasive species that are identified using different demographic criteria, may obscure traits possessed by particular subsets of invasive species. Traits promoting high abundance likely differ from those enabling fast spread and broad ranges. Examining traits linked with the four demographic dimensions of invasiveness will highlight species at risk of becoming dominant, spreading quickly or occupying large ranges.