School of Agriculture, Food and Ecosystem Sciences - Research Publications

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    Soil seed banks provide a storage effect in post-logging regrowth forests southeastern Australia
    Singh, A ; Nitschke, CR ; Hui, FKC ; Baker, P ; Kasel, S (ELSEVIER, 2023-11-15)
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    Canopy Composition and Spatial Configuration Influences Beta Diversity in Temperate Regrowth Forests of Southeastern Australia
    Singh, A ; Wagner, B ; Kasel, S ; Baker, PJ ; Nitschke, CR (MDPI, 2023-03)
    Structural features of the overstorey in managed and unmanaged forests can significantly influence plant community composition. Native Acacia species are common in temperate eucalypt forests in southeastern Australia. In these forests, intense disturbances, such as logging and wildfire, lead to high densities of regenerating trees, shrubs, and herbs. The tree layer is dominated by Acacia and Eucalyptus, that compete intensely for resources in the first decades after stand establishment. The relative abundance and size of Acacia and Eucalyptus varies widely due to stochastic factors such as dispersal, microsite variability, and weather and climatic conditions. This variability may influence the structure and composition of the herbaceous and shrub species. In the temperate forests of southeastern Australia, understorey plant diversity is assumed to be influenced by Acacia species density, rather than Eucalyptus density. To quantify the influence of Acacia and Eucalyptus density on plant community composition, we used remote sensing and machine learning methods to map canopy composition and then compare it to understorey composition. We combined unoccupied aerial vehicle (UAV or drone) imagery, supervised image classifications, and ground survey data of plant composition from post-logging regrowth forests in the Central Highlands of southeastern Australia. We found that aggregation and patch metrics of Eucalyptus and Acacia were strongly associated with understorey plant beta diversity. Increasing aggregation of Acacia and the number of Acacia patches had a significant negative effect on plant beta diversity, while the number of Eucalyptus patches had a positive influence. Our research demonstrates how accessible UAV remote sensing can be used to quantify variability in plant biodiversity in regrowth forests. This can help forest managers map patterns of plant diversity at the stand-scale and beyond to guide management activities across forested landscapes.
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    Characteristics of a multi-species conifer network of wood properties chronologies from Southern Australia
    Allen, KJ ; Nichols, SC ; Evans, R ; Baker, PJ (ELSEVIER GMBH, 2022-12)
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    Acacia Density, Edaphic, and Climatic Factors Shape Plant Assemblages in Regrowth Montane Forests in Southeastern Australia
    Singh, A ; Kasel, S ; Hui, FKC ; Trouve, R ; Baker, PJ ; Nitschke, CR (MDPI, 2023-06)
    A fundamental requirement of sustainable forest management is that stands are adequately regenerated after harvesting. To date, most research has focused on the regeneration of the dominant timber species and to a lesser degree on plant communities. Few studies have explored the impact of the regeneration success of dominant tree species on plant community composition and diversity. In this study, we quantified the influence of variability in tree density and climatic and edaphic factors on plant species diversity in montane regrowth forests dominated by Eucalyptus regnans in the Central Highlands of Victoria in southeastern Australia. We found that Acacia density shaped plant biodiversity more than Eucalyptus density. Edaphic factors, particularly soil nutrition and moisture availability, played a significant role in shaping species turnover and occurrence. Our findings suggest that the density of Acacia is a key biotic filter that influences the occurrence of many understorey plant species and shapes plant community turnover. This should be considered when assessing the impacts of both natural and anthropogenic disturbances on plant biodiversity in the montane forests of southeastern Australia.
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    Joint effects of climate, tree size, and year on annual tree growth derived from tree-ring records of ten globally distributed forests
    Anderson-Teixeira, KJ ; Herrmann, V ; Rollinson, CR ; Gonzalez, B ; Gonzalez-Akre, EB ; Pederson, N ; Alexander, MR ; Allen, CD ; Alfaro-Sanchez, R ; Awada, T ; Baltzer, JL ; Baker, PJ ; Birch, JD ; Bunyavejchewin, S ; Cherubini, P ; Davies, SJ ; Dow, C ; Helcoski, R ; Kaspar, J ; Lutz, JA ; Margolis, EQ ; Maxwell, JT ; McMahon, SM ; Piponiot, C ; Russo, SE ; Samonil, P ; Sniderhan, AE ; Tepley, AJ ; Vasickova, I ; Vlam, M ; Zuidema, PA (WILEY, 2022-01)
    Tree rings provide an invaluable long-term record for understanding how climate and other drivers shape tree growth and forest productivity. However, conventional tree-ring analysis methods were not designed to simultaneously test effects of climate, tree size, and other drivers on individual growth. This has limited the potential to test ecologically relevant hypotheses on tree growth sensitivity to environmental drivers and their interactions with tree size. Here, we develop and apply a new method to simultaneously model nonlinear effects of primary climate drivers, reconstructed tree diameter at breast height (DBH), and calendar year in generalized least squares models that account for the temporal autocorrelation inherent to each individual tree's growth. We analyze data from 3811 trees representing 40 species at 10 globally distributed sites, showing that precipitation, temperature, DBH, and calendar year have additively, and often interactively, influenced annual growth over the past 120 years. Growth responses were predominantly positive to precipitation (usually over ≥3-month seasonal windows) and negative to temperature (usually maximum temperature, over ≤3-month seasonal windows), with concave-down responses in 63% of relationships. Climate sensitivity commonly varied with DBH (45% of cases tested), with larger trees usually more sensitive. Trends in ring width at small DBH were linked to the light environment under which trees established, but basal area or biomass increments consistently reached maxima at intermediate DBH. Accounting for climate and DBH, growth rate declined over time for 92% of species in secondary or disturbed stands, whereas growth trends were mixed in older forests. These trends were largely attributable to stand dynamics as cohorts and stands age, which remain challenging to disentangle from global change drivers. By providing a parsimonious approach for characterizing multiple interacting drivers of tree growth, our method reveals a more complete picture of the factors influencing growth than has previously been possible.
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    The role of climatic variability on Eucalyptus regeneration in southeastern Australia
    Singh, A ; Baker, PJ ; Kasel, S ; Trouve, R ; Stewart, SB ; Nitschke, CR (ELSEVIER, 2021-12)
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    Fire Impacts on Recruitment Dynamics in a Seasonal Tropical Forest in Continental Southeast Asia
    Kaewsong, K ; Johnson, DJ ; Bunyavejchewin, S ; Baker, PJ (MDPI, 2022-01)
    The effects of forest fires on tree recruitment dynamics in tropical forests is important for predicting forest dynamics and ecosystem function in Southeast Asia. To our knowledge, no studies have examined the effects of fire intensity on community-level recruitment patterns in tropical forests due to the rarity of long-term observation datasets in fire-impacted tropical forests and the difficulty of quantifying fire intensity. We addressed two questions: (1) is tree recruitment among species affected by fire intensity? and if so, (2) are there specific plant functional traits associated with these responses? We used data from a long-term forest dynamics plot at the Huai Kha Khaeng (HKK) Wildlife Sanctuary in Thailand. The HKK plot occurs in a strongly seasonal tropical environment and has experienced several fires since its establishment in 1994. We found 46 tree species (52% of the 89 species analysed) showed evidence of reduced recruitment rates with increasing fire intensities during the most recent fire in 2005. Tree species in this flammable landscape have various leaf and wood functional traits associated with fire. Spatial and temporal variability in fire activity may lead to alterations in long-term taxonomic and functional composition of the forest due to selection on fire-related traits.
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    The influence of spatial patterns in foraging habitat on the abundance and home range size of a vulnerable arboreal marsupial in southeast Australia
    Wagner, B ; Baker, PJ ; Nitschke, CR (WILEY, 2021-12)
    Abstract Wildlife can persist in a range of landscape configurations, but population densities can vary due to resource availability. Resources and environmental conditions shaping habitat suitability may be spatially dispersed or clumped, which can drive habitat availability. We explored how spatial configuration and aggregation of favorable feeding resources and climatic conditions affect populations of the greater glider (Petauroides volans), an arboreal marsupial in southeast Australia, vulnerable to climate change and disturbances. We hypothesized home‐range functionality from literature and field observations and used a generalized spatial framework based on neutral landscape models to test how spatial aggregation influences home‐range sizes and population structure. At the landscape scale, any decrease in climatic suitability also decreased potential population density, independent of the initial spatial configuration of the feeding landscape. At the stand scale however, the spatial configuration of feeding habitat drove population density. Dispersed resources required increased home‐range sizes for individual greater gliders to obtain feeding resources and resulted in smaller populations. Clumped resources supported larger populations, even when only small fractions of the stand contained feeding habitat. Disturbances to these resources could either retain populations or lead to extinction, depending on spatial aggregation and disturbance intensity. Increasingly severe dispersed disturbances caused potential home ranges to disappear more rapidly and remaining home ranges to become larger and contain less feeding habitat. The ability of greater gliders to establish populations and persist under disturbance was therefore highly dependent on the spatial aggregation of habitat resources and the type and severity of disturbance. Changes in climate act at a different scale and may override favorable habitat conditions at the stand level. Our results have implications for the conservation and retention of critical feeding habitat for greater gliders and provide insights into important factors to ensure population persistence under climate change and forest management.
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    Evaluating the dendroclimatological potential of blue intensity on multiple conifer species from Tasmania and New Zealand
    Wilson, R ; Allen, K ; Baker, P ; Boswijk, G ; Buckley, B ; Cook, E ; D'Arrigo, R ; Druckenbrod, D ; Fowler, A ; Grandjean, M ; Krusic, P ; Palmer, J (COPERNICUS GESELLSCHAFT MBH, 2021-12-14)
    Abstract. We evaluate a range of blue intensity (BI) tree-ring parameters in eight conifer species (12 sites) from Tasmania and New Zealand for their dendroclimatic potential, and as surrogate wood anatomical proxies. Using a dataset of ca. 10–15 trees per site, we measured earlywood maximum blue intensity (EWB), latewood minimum blue intensity (LWB), and the associated delta blue intensity (DB) parameter for dendrochronological analysis. No resin extraction was performed, impacting low-frequency trends. Therefore, we focused only on the high-frequency signal by detrending all tree-ring and climate data using a 20-year cubic smoothing spline. All BI parameters express low relative variance and weak signal strength compared to ring width. Correlation analysis and principal component regression experiments identified a weak and variable climate response for most ring-width chronologies. However, for most sites, the EWB data, despite weak signal strength, expressed strong coherence with summer temperatures. Significant correlations for LWB were also noted, but the sign of the relationship for most species is opposite to that reported for all conifer species in the Northern Hemisphere. DB results were mixed but performed better for the Tasmanian sites when combined through principal component regression methods than for New Zealand. Using the full multi-species/parameter network, excellent summer temperature calibration was identified for both Tasmania and New Zealand ranging from 52 % to 78 % explained variance for split periods (1901–1950/1951–1995), with equally robust independent validation (coefficient of efficiency = 0.41 to 0.77). Comparison of the Tasmanian BI reconstruction with a quantitative wood anatomical (QWA) reconstruction shows that these parameters record essentially the same strong high-frequency summer temperature signal. Despite these excellent results, a substantial challenge exists with the capture of potential secular-scale climate trends. Although DB, band-pass, and other signal processing methods may help with this issue, substantially more experimentation is needed in conjunction with comparative analysis with ring density and QWA measurements.
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    Mapping canopy nitrogen-scapes to assess foraging habitat for a vulnerable arboreal folivore in mixed-species Eucalyptus forests
    Wagner, B ; Baker, PJ ; Moore, BD ; Nitschke, CR (WILEY, 2021-12)
    Herbivore foraging decisions are closely related to plant nutritional quality. For arboreal folivores with specialized diets, such as the vulnerable greater glider (Petauroides volans), the abundance of suitable forage trees can influence habitat suitability and species occurrence. The ability to model and map foliar nitrogen would therefore enhance our understanding of folivore habitat use at finer scales. We tested whether high-resolution multispectral imagery, collected by a lightweight and low-cost commercial unoccupied aerial vehicle (UAV), could be used to predict total and digestible foliar nitrogen (N and digN) at the tree canopy level and forest stand-scale from leaf-scale chemistry measurements across a gradient of mixed-species Eucalyptus forests in southeastern Australia. We surveyed temperate Eucalyptus forests across an elevational and topographic gradient from sea level to high elevation (50-1200 m a.s.l.) for forest structure, leaf chemistry, and greater glider occurrence. Using measures of multispectral leaf reflectance and spectral indices, we estimated N and digN and mapped N and favorable feeding habitat using machine learning algorithms. Our surveys covered 17 Eucalyptus species ranging in foliar N from 0.63% to 1.92% dry matter (DM) and digN from 0.45% to 1.73% DM. Both multispectral leaf reflectance and spectral indices were strong predictors for N and digN in model cross-validation. At the tree level, 79% of variability between observed and predicted measures of nitrogen was explained. A spatial supervised classification model correctly identified 80% of canopy pixels associated with high N concentrations (≥1% DM). We developed a successful method for estimating foliar nitrogen of a range of temperate Eucalyptus species using UAV multispectral imagery at the tree canopy level and stand scale. The ability to spatially quantify feeding habitat using UAV imagery allows remote assessments of greater glider habitat at a scale relevant to support ground surveys, management, and conservation for the vulnerable greater glider across southeastern Australia.