School of Agriculture, Food and Ecosystem Sciences - Research Publications

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    A 277 year cool season dam inflow reconstruction for Tasmania, southeastern Australia
    Allen, KJ ; Nichols, SC ; Evans, R ; Allie, S ; Carson, G ; Ling, F ; Cook, ER ; Lee, G ; Baker, PJ (AMER GEOPHYSICAL UNION, 2017-01)
    Abstract Seasonal variability is a significant source of uncertainty in projected changes to precipitation across southeastern Australia (SEA). While existing instrumental records provide seasonal data for recent decades, most proxy records (e.g., tree rings, corals, speleothems) offer only annual reconstructions of hydroclimate. We present the first cool‐season (July–August) reconstruction of dam inflow (Lake Burbury) for western Tasmania in SEA based on tree‐ring width (Athrotaxis selaginoides) and mean latewood cell wall thickness (Phyllocladus aspleniifolius) chronologies. The reconstruction, produced using principal component regression, verifies back to 1731 and is moderately skillful, explaining around 23% of the variance. According to the reconstruction, relatively low inflow periods occurred around 1860, the early 1900s and 1970, while relatively high inflows occurred in the 1770s and 1810s. Highest reconstructed inflows occurred in 1816, and lowest in 1909. Comparison with available documentary and instrumental records indicates that the reconstruction better captures high rather than low flow events. There is virtually no correlation between our reconstruction and another for December–January inflow for the same catchment, a result consistent with the relationship between seasonal instrumental data. This suggests that conditions in one season have not generally reflected conditions in the other season over the instrumental record, or for the past 277 years. This illustrates the value of obtaining reconstructions of regional hydroclimatic variability for multiple individual seasons in regions where dry and wet seasons are not strongly defined. The results also indicate that the hydroclimate of the southeastern Australian region cannot be adequately represented by a single regional reconstruction.
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    The paleoclimate context and future trajectory of extreme summer hydroclimate in eastern Australia
    Cook, BI ; Palmer, JG ; Cook, ER ; Turney, CSM ; Allen, K ; Fenwick, P ; O'Donnell, A ; Lough, JM ; Grierson, PF ; Ho, M ; Baker, PJ (AMER GEOPHYSICAL UNION, 2016-11-16)
    Eastern Australia recently experienced an intense drought (Millennium Drought, 2003-2009) and record-breaking rainfall and flooding (austral summer 2010-2011). There is some limited evidence for a climate change contribution to these events, but such analyses are hampered by the paucity of information on long-term natural variability. Analyzing a new reconstruction of summer (December-January-February) Palmer Drought Severity Index (the Australia-New Zealand Drought Atlas; ANZDA, 1500-2012 CE), we find moisture deficits during the Millennium Drought fall within the range of the last 500 years of natural hydroclimate variability. This variability includes periods of multi-decadal drought in the 1500s more persistent than any event in the historical record. However, the severity of the Millennium Drought, which was caused by autumn (March-April-May) precipitation declines, may be underestimated in the ANZDA because the reconstruction is biased towards summer and antecedent spring (September-October-November) precipitation. The pluvial in 2011, however, which was characterized by extreme summer rainfall faithfully captured by the ANZDA, is likely the wettest year in the reconstruction for Coastal Queensland. Climate projections (RCP 8.5 scenario) suggest that eastern Australia will experience long-term drying during the 21st century. While the contribution of anthropogenic forcing to recent extremes remains an open question, these projections indicate an amplified risk of multi-year drought anomalies matching or exceeding the intensity of the Millennium Drought.
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    Recruitment of a keystone tree species must concurrently manage flooding and browsing
    Horner, GJ ; Cunningham, SC ; Thomson, JR ; Baker, PJ ; Mac Nally, R ; Moreno Mateos, D (WILEY, 2016-06)
    Summary Multiple pressures (land‐use change, water extraction and climate change) interact to influence biodiversity and ecosystem processes, but direct evidence for interactions among multiple pressures is limited. Floodplain forests are an acute example of how interacting pressures (river regulation, water extraction, decreasing rainfall and mammal browsing) interact to degrade native ecosystems. We conducted a 2‐year field experiment to determine how flooding, browsing and sediment salinity interacted to determine in situ seedling survival and growth of the keystone floodplain tree species (Eucalyptus camaldulensis Dehnh.). On semi‐arid floodplains of southern Australia, 1‐year‐old seedlings were planted on the banks of six ephemeral creeks, three of which were flooded with management flows before planting while the others remained dry. Four plots were established at each creek, two open to browsing and two fenced to exclude mammal herbivores. Flooding had a strong positive effect on seedling survival and height, but browsing had strong negative effects. Sediment salinity (a covariate rather than a designed effect) had a weak negative effect on seedling survival and height. The positive effects of flooding were largely offset by the negative interaction with browsing and, to a lesser extent, sediment salinity. Although flooding has been restored to some degraded floodplain forests subjected to river regulation and a drying climate, the long‐term success of such actions is likely to be undermined by persistent browsing. Synthesis and applications. Management actions that focus on single pressures (e.g. infrequent flooding) and processes (e.g. mature tree survival) while ignoring other pressures are unlikely to sustain populations of keystone species, suggesting that complementary strategies (managed flooding with herbivore control) are necessary to sustain recruitment and, therefore, ensure the future health of these essential ecosystems.
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    The existence of a fire-mediated tree-recruitment bottleneck in an Asian savanna
    Nguyen, TT ; Murphy, BP ; Baker, PJ (WILEY, 2019-04)
    AIM: A considerable proportion of the global savanna biome has been mis‐classified as forest, especially in Asia. However, the structure and responses of dominant tree species to fire can help to clarify this ambiguity. Here, we examine demographic structure and fire responses of four dominant tree species in a deciduous dipterocarp forest (DDF) of the continental Southeast Asia. We examine whether fire creates a tree‐recruitment bottleneck in the DDF, as in savannas on other continents. LOCATION: YokDon National Park, Vietnam. TAXON: Dipterocarpus tuberculatus Roxb.; Dipterocarpus obtusifolius Teysm. ex Miq.; Shorea obtusa Wall. ex Blume; Shorea siamensis (Kurz) Miq. METHODS: We measured the size of all 8,288 individuals of the four dominant dipterocarp species in 12 pair study sites. We then applied fire treatments (burnt or unburnt) to the plots and monitored the survival and growth of juveniles five times over the subsequent growing season. RESULTS: All four species showed clear indications of a recruitment bottleneck at the sapling stage. Almost all juveniles in the burnt plots suffered aboveground mortality, but 64% resprouted by the end of the following growing season. Compared to large juveniles, small juveniles had a significantly higher probability of aboveground mortality and a more limited ability to resprout. Within 3 months of fire, 43%–93% of individuals had resprouted, and they had recovered 67%–95% of their pre‐fire basal diameter and 43%–94% of their pre‐fire height. At the end of the post‐fire growing season, burnt juveniles experienced virtually no net increase in size; however, juveniles in unburnt plots attained up to 150% of their pre‐fire size. MAIN CONCLUSIONS: The four dominant tree species of the DDF show remarkable similarities in the demographic structures and fire‐responses with savanna tree species on other continents. Our results are consistent with the notion that the DDF is functionally similar to savannas on other continents. Fire appears to act as potent environmental filter of tree species composition in the DDF.
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    Recruitment bottlenecks in the rare Australian conifer Wollemia nobilis
    Zimmer, HC ; Auld, TD ; Benson, J ; Baker, PJ (SPRINGER, 2014-01)
    Seedling survival plays a critical role in maintaining a supply of potential recruits. We examined seedling recruitment, survival and growth in Wollemia nobilis, a rare, long-lived Australian conifer. Wollemia nobilis seedlings and juveniles were monitored for 16� years (1996–2011). While W. nobilis can recruit from seed and, unlike most conifers, persist through resprouting, seed-based recruitment was the primary focus of this study. Sixty-five per cent of new seedlings died within their first year and only 7� % persisted for the 16-year monitoring period. However, 44� % of established juvenile plants (of unknown age at the beginning of the study) persisted throughout the 16-year monitoring period. Growth of seedlings and juveniles was very slow; growth estimates for most individuals had 95� % confidence intervals that included zero. The recruitment strategy of W. nobilis may be to maintain a slow-growing juvenile bank—a strategy typical of other shade-tolerant rainforest trees, including other Araucariaceae. Seedling recruitment in W. nobilis may act together with resprouting to maintain the population.
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    Temperature and rainfall strongly drive temporal growth variation in Asian tropical forest trees
    Vlam, M ; Baker, PJ ; Bunyavejchewin, S ; Zuidema, PA (SPRINGER, 2014-04)
    Climate change effects on growth rates of tropical trees may lead to alterations in carbon cycling of carbon-rich tropical forests. However, climate sensitivity of broad-leaved lowland tropical trees is poorly understood. Dendrochronology (tree-ring analysis) provides a powerful tool to study the relationship between tropical tree growth and annual climate variability. We aimed to establish climate-growth relationships for five annual-ring forming tree species, using ring-width data from 459 canopy and understory trees from a seasonal tropical forest in western Thailand. Based on 183/459 trees, chronologies with total lengths between 29 and 62 years were produced for four out of five species. Bootstrapped correlation analysis revealed that climate-growth responses were similar among these four species. Growth was significantly negatively correlated with current-year maximum and minimum temperatures, and positively correlated with dry-season precipitation levels. Negative correlations between growth and temperature may be attributed to a positive relationship between temperature and autotrophic respiration rates. The positive relationship between growth and dry-season precipitation levels likely reflects the strong water demand during leaf flush. Mixed-effect models yielded results that were consistent across species: a negative effect of current wet-season maximum temperatures on growth, but also additive positive effects of, for example, prior dry-season maximum temperatures. Our analyses showed that annual growth variability in tropical trees is determined by a combination of both temperature and precipitation variability. With rising temperature, the predominantly negative relationship between temperature and growth may imply decreasing growth rates of tropical trees as a result of global warming.
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    The number of days on which increment occurs is the primary determinant of annual ring width in Callitris intratropica
    Drew, DM ; Richards, AE ; Cook, GD ; Downes, GM ; Gill, W ; Baker, PJ (SPRINGER HEIDELBERG, 2014-02)
    KEY MESSAGE : The number of days on which a measureable increment occurred, and the average rate of stem growth, rather than the overall duration of the wet season, were the main determinants of ring width in young Callitris intratropica trees. These effects were amplified by competition. Dendroclimatology of tropical tree species is an important tool for understanding past climatic variability at low latitudes where long-term weather records are often absent. Despite the growing number of published tropical tree-ring chronologies, however, still little is known of the factors that control annual ring formation in tropical tree species. In this paper we used an endemic Australian conifer, Callitris intratropica, to study the intra-annual dynamics of seasonal growth and xylem formation, and the effects of environmental conditions and competition, on growth ring formation. We combined high-resolution growth and climate monitoring (every 15 min for 2 years) with less frequent cambial sampling. Trees exhibited marked reductions in growth during certain periods within the rainy season when rainfall was not as regular and VPD was high. Overall, we found that ring width was most influenced by the number of days when increment occurred; regardless of how early the growing season began or ended, and by the rates of tracheid production. The effect of competition was also important. Trees growing in dense groves had narrower annual rings (4.6 mm) than trees that were growing in the open (6.7 mm), due to less active cambia, slower rates of xylem production and expansion and more increment days, although the overall growing season duration was also shorter in grove trees.
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    The neglected tool in the Bayesian ecologist's shed: a case study testing informative priors' effect on model accuracy
    Morris, WK ; Vesk, PA ; McCarthy, MA ; Bunyavejchewin, S ; Baker, PJ (WILEY-BLACKWELL, 2015-01)
    Despite benefits for precision, ecologists rarely use informative priors. One reason that ecologists may prefer vague priors is the perception that informative priors reduce accuracy. To date, no ecological study has empirically evaluated data-derived informative priors' effects on precision and accuracy. To determine the impacts of priors, we evaluated mortality models for tree species using data from a forest dynamics plot in Thailand. Half the models used vague priors, and the remaining half had informative priors. We found precision was greater when using informative priors, but effects on accuracy were more variable. In some cases, prior information improved accuracy, while in others, it was reduced. On average, models with informative priors were no more or less accurate than models without. Our analyses provide a detailed case study on the simultaneous effect of prior information on precision and accuracy and demonstrate that when priors are specified appropriately, they lead to greater precision without systematically reducing model accuracy.
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    δ18O in the Tropical Conifer Agathis robusta Records ENSO-Related Precipitation Variations
    Boysen, BMM ; Evans, MN ; Baker, PJ ; Wilf, P (PUBLIC LIBRARY SCIENCE, 2014-07-25)
    Long-lived trees from tropical Australasia are a potential source of information about internal variability of the El Niño-Southern Oscillation (ENSO), because they occur in a region where precipitation variability is closely associated with ENSO activity. We measured tree-ring width and oxygen isotopic composition (δ18O) of α-cellulose from Agathis robusta (Queensland Kauri) samples collected in the Atherton Tablelands, Queensland, Australia. Standard ring-width chronologies yielded low internal consistency due to the frequent presence of false ring-like anatomical features. However, in a detailed examination of the most recent 15 years of growth (1995-2010), we found significant correlation between δ18O and local precipitation, the latter associated with ENSO activity. The results are consistent with process-based forward modeling of the oxygen isotopic composition of α-cellulose. The δ18O record also enabled us to confirm the presence of a false growth ring in one of the three samples in the composite record, and to determine that it occurred as a consequence of anomalously low rainfall in the middle of the 2004/5 rainy season. The combination of incremental growth and isotopic measures may be a powerful approach to development of long-term (150+ year) ENSO reconstructions from the terrestrial tropics of Australasia.
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    Establishing a Wild, Ex Situ Population of a Critically Endangered Shade-Tolerant Rainforest Conifer: A Translocation Experiment
    Zimmer, HC ; Offord, CA ; Auld, TD ; Baker, PJ ; Delzon, S (PUBLIC LIBRARY SCIENCE, 2016-07-12)
    Translocation can reduce extinction risk by increasing population size and geographic range, and is increasingly being used in the management of rare and threatened plant species. A critical determinant of successful plant establishment is light environment. Wollemia nobilis (Wollemi pine) is a critically endangered conifer, with a wild population of 83 mature trees and a highly restricted distribution of less than 10 km2. We used under-planting to establish a population of W. nobilis in a new rainforest site. Because its optimal establishment conditions were unknown, we conducted an experimental translocation, planting in a range of different light conditions from deeply shaded to high light gaps. Two years after the experimental translocation, 85% of plants had survived. There were two distinct responses: very high survival (94%) but very low growth, and lower survival (69%) and higher growth, associated with initial plant condition. Overall survival of translocated W. nobilis was strongly increased in planting sites with higher light, in contrast to previous studies demonstrating long-term survival of wild W. nobilis juveniles in deep shade. Translocation by under-planting may be useful in establishing new populations of shade-tolerant plant species, not least by utilizing the range of light conditions that occur in forest understories.