Medical Biology - Research Publications

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    Caspase-8-driven apoptotic and pyroptotic crosstalk causes cell death and IL-1β release in X-linked inhibitor of apoptosis (XIAP) deficiency
    Hughes, SA ; Lin, M ; Weir, A ; Huang, B ; Xiong, L ; Chua, NK ; Pang, J ; Santavanond, JP ; Tixeira, R ; Doerflinger, M ; Deng, Y ; Yu, C-H ; Silke, N ; Conos, SA ; Frank, D ; Simpson, DS ; Murphy, JM ; Lawlor, KE ; Pearson, JS ; Silke, J ; Pellegrini, M ; Herold, M ; Poon, IKH ; Masters, SL ; Li, M ; Tang, Q ; Zhang, Y ; Rashidi, M ; Geng, L ; Vince, JE (WILEY, 2023-03-01)
    Genetic lesions in X-linked inhibitor of apoptosis (XIAP) pre-dispose humans to cell death-associated inflammatory diseases, although the underlying mechanisms remain unclear. Here, we report that two patients with XIAP deficiency-associated inflammatory bowel disease display increased inflammatory IL-1β maturation as well as cell death-associated caspase-8 and Gasdermin D (GSDMD) processing in diseased tissue, which is reduced upon patient treatment. Loss of XIAP leads to caspase-8-driven cell death and bioactive IL-1β release that is only abrogated by combined deletion of the apoptotic and pyroptotic cell death machinery. Namely, extrinsic apoptotic caspase-8 promotes pyroptotic GSDMD processing that kills macrophages lacking both inflammasome and apoptosis signalling components (caspase-1, -3, -7, -11 and BID), while caspase-8 can still cause cell death in the absence of both GSDMD and GSDME when caspase-3 and caspase-7 are present. Neither caspase-3 and caspase-7-mediated activation of the pannexin-1 channel, or GSDMD loss, prevented NLRP3 inflammasome assembly and consequent caspase-1 and IL-1β maturation downstream of XIAP inhibition and caspase-8 activation, even though the pannexin-1 channel was required for NLRP3 triggering upon mitochondrial apoptosis. These findings uncouple the mechanisms of cell death and NLRP3 activation resulting from extrinsic and intrinsic apoptosis signalling, reveal how XIAP loss can co-opt dual cell death programs, and uncover strategies for targeting the cell death and inflammatory pathways that result from XIAP deficiency.
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    Tankyrase-mediated ADP-ribosylation is a regulator of TNF-induced death
    Liu, L ; Sandow, JJ ; Pedrioli, DML ; Samson, AL ; Silke, N ; Kratina, T ; Ambrose, RL ; Doerflinger, M ; Hu, Z ; Morrish, E ; Chau, D ; Kueh, AJ ; Fitzibbon, C ; Pellegrini, M ; Pearson, JS ; Hottiger, MO ; Webb, A ; Lalaoui, N ; Silke, J (AMER ASSOC ADVANCEMENT SCIENCE, 2022-05)
    Tumor necrosis factor (TNF) is a key component of the innate immune response. Upon binding to its receptor, TNFR1, it promotes production of other cytokines via a membrane-bound complex 1 or induces cell death via a cytosolic complex 2. To understand how TNF-induced cell death is regulated, we performed mass spectrometry of complex 2 and identified tankyrase-1 as a native component that, upon a death stimulus, mediates complex 2 poly-ADP-ribosylation (PARylation). PARylation promotes recruitment of the E3 ligase RNF146, resulting in proteasomal degradation of complex 2, thereby limiting cell death. Expression of the ADP-ribose-binding/hydrolyzing severe acute respiratory syndrome coronavirus 2 macrodomain sensitizes cells to TNF-induced death via abolishing complex 2 PARylation. This suggests that disruption of ADP-ribosylation during an infection can prime a cell to retaliate with an inflammatory cell death.
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    Targeting the Extrinsic Pathway of Hepatocyte Apoptosis Promotes Clearance of Plasmodium Liver Infection
    Ebert, G ; Lopaticki, S ; O'Neill, MT ; Steel, RWJ ; Doerflinger, M ; Rajasekaran, P ; Yang, ASP ; Erickson, S ; Ioannidis, L ; Arandjelovic, P ; Mackiewicz, L ; Allison, C ; Silke, J ; Pellegrini, M ; Boddey, JA (CELL PRESS, 2020-03-31)
    Plasmodium sporozoites infect the liver and develop into exoerythrocytic merozoites that initiate blood-stage disease. The hepatocyte molecular pathways that permit or abrogate parasite replication and merozoite formation have not been thoroughly explored, and a deeper understanding may identify therapeutic strategies to mitigate malaria. Cellular inhibitor of apoptosis (cIAP) proteins regulate cell survival and are co-opted by intracellular pathogens to support development. Here, we show that cIAP1 levels are upregulated during Plasmodium liver infection and that genetic or pharmacological targeting of cIAPs using clinical-stage antagonists preferentially kills infected hepatocytes and promotes immunity. Using gene-targeted mice, the mechanism was defined as TNF-TNFR1-mediated apoptosis via caspases 3 and 8 to clear parasites. This study reveals the importance of cIAPs to Plasmodium infection and demonstrates that host-directed antimalarial drugs can eliminate liver parasites and induce immunity while likely providing a high barrier to resistance in the parasite.
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    Necroptotic signaling is primed in Mycobacterium tuberculosis-infected macrophages, but its pathophysiological consequence in disease is restricted
    Stutz, MD ; Ojaimi, S ; Allison, C ; Preston, S ; Arandjelovic, P ; Hildebrand, JM ; Sandow, JJ ; Webb, AI ; Silke, J ; Alexander, WS ; Pellegrini, M (NATURE PUBLISHING GROUP, 2018-05)
    Mixed lineage kinase domain-like (MLKL)-dependent necroptosis is thought to be implicated in the death of mycobacteria-infected macrophages, reportedly allowing escape and dissemination of the microorganism. Given the consequent interest in developing inhibitors of necroptosis to treat Mycobacterium tuberculosis (Mtb) infection, we used human pharmacologic and murine genetic models to definitively establish the pathophysiological role of necroptosis in Mtb infection. We observed that Mtb infection of macrophages remodeled the intracellular signaling landscape by upregulating MLKL, TNFR1, and ZBP1, whilst downregulating cIAP1, thereby establishing a strong pro-necroptotic milieu. However, blocking necroptosis either by deleting Mlkl or inhibiting RIPK1 had no effect on the survival of infected human or murine macrophages. Consistent with this, MLKL-deficiency or treatment of humanized mice with the RIPK1 inhibitor Nec-1s did not impact on disease outcomes in vivo, with mice displaying lung histopathology and bacterial burdens indistinguishable from controls. Therefore, although the necroptotic pathway is primed by Mtb infection, macrophage necroptosis is ultimately restricted to mitigate disease pathogenesis. We identified cFLIP upregulation that may promote caspase 8-mediated degradation of CYLD, and other necrosome components, as a possible mechanism abrogating Mtb's capacity to coopt necroptotic signaling. Variability in the capacity of these mechanisms to interfere with necroptosis may influence disease severity and could explain the heterogeneity of Mtb infection and disease.
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    Clinical MDR1 inhibitors enhance Smac-mimetic bioavailability to kill murine LSCs and improve survival in AML models
    Morrish, E ; Copeland, A ; Moujalled, DM ; Powell, JA ; Silke, N ; Lin, A ; Jarman, KE ; Sandow, JJ ; Ebert, G ; Mackiewicz, L ; Beach, JA ; Christie, EL ; Lewis, AC ; Pomilio, G ; Fischer, KC ; MacPherson, L ; Bowtell, DDL ; Webb, A ; Pellegrini, M ; Dawson, MA ; Pitson, SM ; Wei, AH ; Silke, J ; Brumatti, G (AMER SOC HEMATOLOGY, 2020-10-27)
    The specific targeting of inhibitor of apoptosis (IAP) proteins by Smac-mimetic (SM) drugs, such as birinapant, has been tested in clinical trials of acute myeloid leukemia (AML) and certain solid cancers. Despite their promising safety profile, SMs have had variable and limited success. Using a library of more than 5700 bioactive compounds, we screened for approaches that could sensitize AML cells to birinapant and identified multidrug resistance protein 1 inhibitors (MDR1i) as a class of clinically approved drugs that can enhance the efficacy of SM therapy. Genetic or pharmacological inhibition of MDR1 increased intracellular levels of birinapant and sensitized AML cells from leukemia murine models, human leukemia cell lines, and primary AML samples to killing by birinapant. The combination of clinical MDR1 and IAP inhibitors was well tolerated in vivo and more effective against leukemic cells, compared with normal hematopoietic progenitors. Importantly, birinapant combined with third-generation MDR1i effectively killed murine leukemic stem cells (LSCs) and prolonged survival of AML-burdened mice, suggesting a therapeutic opportunity for AML. This study identified a drug combination strategy that, by efficiently killing LSCs, may have the potential to improve outcomes in patients with AML.
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    Combinatorial Treatment of Birinapant and Zosuquidar Enhances Effective Control of HBV Replication In Vivo
    Morrish, E ; Mackiewicz, L ; Silke, N ; Pellegrini, M ; Silke, J ; Brumatti, G ; Ebert, G (MDPI, 2020-08)
    Chronic hepatitis B virus (HBV) infection remains a global health threat and affects hundreds of millions worldwide. Small molecule compounds that mimic natural antagonists of inhibitor of apoptosis (IAP) proteins, known as Smac-mimetics (second mitochondria-derived activator of caspases-mimetics), can promote the death of HBV-replicating liver cells and promote clearance of infection in preclinical models of HBV infection. The Smac-mimetic birinapant is a substrate of the multidrug resistance protein 1 (MDR1) efflux pump, and therefore inhibitors of MDR1 increase intracellular concentration of birinapant in MDR1 expressing cells. Liver cells are known to express MDR1 and other drug pump proteins. In this study, we investigated whether combining the clinical drugs, birinapant and the MDR1 inhibitor zosuquidar, increases the efficacy of birinapant in killing HBV expressing liver cells. We showed that this combination treatment is well tolerated and, compared to birinapant single agent, was more efficient at inducing death of HBV-positive liver cells and improving HBV-DNA and HBV surface antigen (HBsAg) control kinetics in an immunocompetent mouse model of HBV infection. Thus, this study identifies a novel and safe combinatorial treatment strategy to potentiate substantial reduction of HBV replication using an IAP antagonist.
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    A missense mutation in the MLKL brace region promotes lethal neonatal inflammation and hematopoietic dysfunction
    Hildebrand, JM ; Kauppi, M ; Majewski, IJ ; Liu, Z ; Cox, AJ ; Miyake, S ; Petrie, EJ ; Silk, MA ; Li, Z ; Tanzer, MC ; Brumatti, G ; Young, SN ; Hall, C ; Garnish, SE ; Corbin, J ; Stutz, MD ; Di Rago, L ; Gangatirkar, P ; Josefsson, EC ; Rigbye, K ; Anderton, H ; Rickard, JA ; Tripaydonis, A ; Sheridan, J ; Scerri, TS ; Jackson, VE ; Czabotar, PE ; Zhang, J-G ; Varghese, L ; Allison, CC ; Pellegrini, M ; Tannahill, GM ; Hatchell, EC ; Willson, TA ; Stockwell, D ; de Graaf, CA ; Collinge, J ; Hilton, A ; Silke, N ; Spall, SK ; Chau, D ; Athanasopoulos, V ; Metcalf, D ; Laxer, RM ; Bassuk, AG ; Darbro, BW ; Singh, MAF ; Vlahovich, N ; Hughes, D ; Kozlovskaia, M ; Ascher, DB ; Warnatz, K ; Venhoff, N ; Thiel, J ; Biben, C ; Blum, S ; Reveille, J ; Hildebrand, MS ; Vinuesa, CG ; McCombe, P ; Brown, MA ; Kile, BT ; McLean, C ; Bahlo, M ; Masters, SL ; Nakano, H ; Ferguson, PJ ; Murphy, JM ; Alexander, WS ; Silke, J (NATURE PORTFOLIO, 2020-06-19)
    MLKL is the essential effector of necroptosis, a form of programmed lytic cell death. We have isolated a mouse strain with a single missense mutation, MlklD139V, that alters the two-helix 'brace' that connects the killer four-helix bundle and regulatory pseudokinase domains. This confers constitutive, RIPK3 independent killing activity to MLKL. Homozygous mutant mice develop lethal postnatal inflammation of the salivary glands and mediastinum. The normal embryonic development of MlklD139V homozygotes until birth, and the absence of any overt phenotype in heterozygotes provides important in vivo precedent for the capacity of cells to clear activated MLKL. These observations offer an important insight into the potential disease-modulating roles of three common human MLKL polymorphisms that encode amino acid substitutions within or adjacent to the brace region. Compound heterozygosity of these variants is found at up to 12-fold the expected frequency in patients that suffer from a pediatric autoinflammatory disease, chronic recurrent multifocal osteomyelitis (CRMO).