Radiology - Research Publications

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    Epileptic spasms are a feature of DEPDC5 mTORopathy
    Carvill, GL ; Crompton, DE ; Regan, BM ; McMahon, JM ; Saykally, J ; Zemel, M ; Schneider, AL ; Dibbens, L ; Howell, KB ; Mandelstam, S ; Leventer, RJ ; Harvey, AS ; Mullen, SA ; Berkovic, SF ; Sullivan, J ; Scheffer, IE ; Mefford, HC (LIPPINCOTT WILLIAMS & WILKINS, 2015-08)
    OBJECTIVE: To assess the presence of DEPDC5 mutations in a cohort of patients with epileptic spasms. METHODS: We performed DEPDC5 resequencing in 130 patients with spasms, segregation analysis of variants of interest, and detailed clinical assessment of patients with possibly and likely pathogenic variants. RESULTS: We identified 3 patients with variants in DEPDC5 in the cohort of 130 patients with spasms. We also describe 3 additional patients with DEPDC5 alterations and epileptic spasms: 2 from a previously described family and a third ascertained by clinical testing. Overall, we describe 6 patients from 5 families with spasms and DEPDC5 variants; 2 arose de novo and 3 were familial. Two individuals had focal cortical dysplasia. Clinical outcome was highly variable. CONCLUSIONS: While recent molecular findings in epileptic spasms emphasize the contribution of de novo mutations, we highlight the relevance of inherited mutations in the setting of a family history of focal epilepsies. We also illustrate the utility of clinical diagnostic testing and detailed phenotypic evaluation in characterizing the constellation of phenotypes associated with DEPDC5 alterations. We expand this phenotypic spectrum to include epileptic spasms, aligning DEPDC5 epilepsies more with the recognized features of other mTORopathies.
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    Epidemiology and etiology of infantile developmental and epileptic encephalopathies in Tasmania
    Ware, TL ; Huskins, SR ; Grinton, BE ; Liu, Y-C ; Bennett, MF ; Harvey, M ; McMahon, J ; Andreopoulos-Malikotsinas, D ; Bahlo, M ; Howell, KB ; Hildebrand, MS ; Damiano, JA ; Rosenfeld, A ; Mackay, MT ; Mandelstam, S ; Leventer, RJ ; Harvey, AS ; Freeman, JL ; Scheffer, IE ; Jones, DL ; Berkovic, SF (WILEY, 2019-09)
    We sought to determine incidence, etiologies, and yield of genetic testing in infantile onset developmental and epileptic encephalopathies (DEEs) in a population isolate, with an intensive multistage approach. Infants born in Tasmania between 2011 and 2016, with seizure onset <2 years of age, epileptiform EEG, frequent seizures, and developmental impairment, were included. Following review of EEG databases, medical records, brain MRIs, and other investigations, clinical genetic testing was undertaken with subsequent research interrogation of whole exome sequencing (WES) in unsolved cases. The incidence of infantile DEEs was 0.44/1000 per year (95% confidence interval 0.25 to 0.71), with 16 cases ascertained. The etiology was structural in 5/16 cases. A genetic basis was identified in 6 of the remaining 11 cases (3 gene panel, 3 WES). In two further cases, WES identified novel variants with strong in silico data; however, paternal DNA was not available to support pathogenicity. The etiology was not determined in 3/16 (19%) cases, with a candidate gene identified in one of these. Pursuing clinical imaging and genetic testing followed by WES at an intensive research level can give a high diagnostic yield in the infantile DEEs, providing a solid base for prognostic and genetic counseling.
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    Second-hit DEPDC5 mutation is limited to dysmorphic neurons in cortical dysplasia type IIA
    Lee, WS ; Stephenson, SEM ; Howell, KB ; Pope, K ; Gillies, G ; Wray, A ; Maixner, W ; Mandelstam, SA ; Berkovic, SF ; Scheffer, IE ; MacGregor, D ; Harvey, AS ; Lockhart, PJ ; Leventer, RJ (WILEY, 2019-07)
    Focal cortical dysplasia (FCD) causes drug-resistant epilepsy and is associated with pathogenic variants in mTOR pathway genes. How germline variants cause these focal lesions is unclear, however a germline + somatic "2-hit" model is hypothesized. In a boy with drug-resistant epilepsy, FCD, and a germline DEPDC5 pathogenic variant, we show that a second-hit DEPDC5 variant is limited to dysmorphic neurons, and the somatic mutation load correlates with both dysmorphic neuron density and the epileptogenic zone. These findings provide new insights into the molecular and cellular correlates of FCD determining drug-resistant epilepsy and refine conceptualization of the epileptogenic zone.
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    EML1-associated brain overgrowth syndrome with ribbon-like heterotopia
    Oegema, R ; McGillivray, G ; Leventer, R ; Le Moing, A-G ; Bahi-Buisson, N ; Barnicoat, A ; Mandelstam, S ; Francis, D ; Francis, F ; Mancini, GMS ; Savelberg, S ; van Haaften, G ; Mankad, K ; Lequin, MH (WILEY, 2019-12)
    EML1 encodes the protein Echinoderm microtubule-associated protein-like 1 or EMAP-1 that binds to the microtubule complex. Mutations in this gene resulting in complex brain malformations have only recently been published with limited clinical descriptions. We provide further clinical and imaging details on three previously published families, and describe two novel unrelated individuals with a homozygous partial EML1 deletion and a homozygous missense variant c.760G>A, p.(Val254Met), respectively. From review of the clinical and imaging data of eight individuals from five families with biallelic EML1 variants, a very consistent imaging phenotype emerges. The clinical syndrome is characterized by mainly neurological features including severe developmental delay, drug-resistant seizures and visual impairment. On brain imaging there is megalencephaly with a characteristic ribbon-like subcortical heterotopia combined with partial or complete callosal agenesis and an overlying polymicrogyria-like cortical malformation. Several of its features can be recognized on prenatal imaging especially the abnormaly formed lateral ventricles, hydrocephalus (in half of the cases) and suspicion of a neuronal migration disorder. In conclusion, biallelic EML1 disease-causing variants cause a highly specific pattern of congenital brain malformations, severe developmental delay, seizures and visual impairment.
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    Familial cortical dysplasia type IIA caused by a germline mutation in DEPDC5
    Scerri, T ; Riseley, JR ; Gillies, G ; Pope, K ; Burgess, R ; Mandelstam, SA ; Dibbens, L ; Chow, CW ; Maixner, W ; Harvey, AS ; Jackson, GD ; Amor, DJ ; Delatycki, MB ; Crino, PB ; Berkovic, SF ; Scheffer, IE ; Bahlo, M ; Lockhart, PJ ; Leventer, RJ (WILEY, 2015-05)
    Whole-exome sequencing of two brothers with drug-resistant, early-onset, focal epilepsy secondary to extensive type IIA focal cortical dysplasia identified a paternally inherited, nonsense variant of DEPDC5 (c.C1663T, p.Arg555*). This variant has previously been reported to cause familial focal epilepsy with variable foci in patients with normal brain imaging. Immunostaining of resected brain tissue from both brothers demonstrated mammalian target of rapamycin (mTOR) activation. This report shows the histopathological features of cortical dysplasia associated with a DEPDC5 mutation, confirms mTOR dysregulation in the malformed tissue and expands the spectrum of neurological manifestations of DEPDC5 mutations to include severe phenotypes with large areas of cortical malformation.