School of Agriculture, Food and Ecosystem Sciences - Theses

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    Flow and geomorphic drivers of instream plants and their biogeomorphic role in riverine ecosystems
    McKendrick, Scott Alexander ( 2023-12)
    Streams are important ecosystems providing multiple benefits to both biodiversity and humans. Despite their importance, many streams are severely degraded globally, driven by anthropogenic impacts such as flow regulation, urbanisation and channelisation. Instream vegetation is a critical component of the stream ecosystem providing many benefits to biota such as provision of habitat and refuge, primary production and nutrient cycling. Instream plants also act as ecosystem engineers, impacting sediment, propagule and organic matter transport and deposition. Despite their importance, many gaps exist in our understanding of the flow and geomorphic drivers of instream plants, and their biogeomorphic role. Field surveys, glasshouse trials and an experiment were combined to investigate questions related to identifying the flow and geomorphic drivers of instream vegetation, and how instream vegetation interacts with propagule and sediment transport. First, a range of streams were surveyed for instream vegetation and geomorphic components, with further geomorphic complexity and flow metrics calculated. Relationships were then investigated between the metrics and amphibious and aquatic vegetation. I then ran an experiment to assess propagule bank and sown seed emergence under a range of flooding durations and frequencies to assess relationships between flow regime and early plant recruitment. Finally, two glasshouse studies were undertaken to assess different preferential deposition locations for propagules, fine sediment and organic matter and the potential for emergent and aquatic plants to act as ecosystem engineers. More frequent flood events with a steeper rate of rise (flashier flows) were negatively associated with amphibious vegetation outcomes but less so for aquatic species. Greater geomorphic complexity, including less bank incision and more stream width and depth variation, were positively associated with instream vegetation outcomes, however, increasingly flashy flows reduced these benefits. More frequent, short flood events also reduced plant recruitment from propagules, however, effect sizes were small, suggesting a range of species may recruit under flashy flows provided other factors are suitable (e.g. refuge from high flow velocity). Greater geomorphic complexity and instream vegetation patches were also associated with more propagule, fine sediment and organic matter deposition, although bare bank samples were also highly retentive. Building on the previous study, emergent vegetation and aquatic vegetation both trapped more propagules, fine sediment and organic matter compared with non-vegetated stream locations. Importantly, however, this trapping function diminished from rural to urban streams. The findings from this thesis suggest that geomorphic complexity promotes instream vegetation outcomes, at least partially through greater deposition of propagules in a range of channel locations. Further deposition of fine sediment and organic matter likely improves recruitment of instream plants. Flashy flow regimes need to be addressed, however, if increasing instream vegetation is a priority in stream restoration, likely through various stormwater control measures. My findings also provide evidence for the importance of instream vegetation on propagule, fine sediment and organic matter deposition. Combined, these results highlight the biogeomorphic importance of instream plants, with their potential to trap propagules, fine sediment and organic matter leading to biogeomorphic succession and driving stream morphodynamics. Both passive and active revegetation approaches may be used to promote the benefits of instream plants, but further research is required. Ultimately, my research highlights the importance of instream vegetation and how to effectively restore instream plants to promote biogeomorphic processes that aid in process-based stream restoration.
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    Photosynthetic responses to light, nitrogen, phosphorus and pruning of Eucalyptus in south-eastern Australia
    Turnbull, Tarryn Louise ( 2005)
    Eucalypts frequently grow faster after additions of fertiliser, but more slowly in the shade or following `green pruning'. The coupling of rates of growth to environmental factors is at least partly due to acclimation of photosynthetic processes. Photosynthesis rarely proceeds at maximum rates in natural environments as photosynthetic processes and the supply of basic requirements of photosynthesis (CO2, H20, light, phosphorus and nitrogen) vary at both short (minutes to hours) and longer (days to months) time scales. Currently we lack mechanistic explanations for how these variables, alone and in combination underpin changed growth rates in Eucalyptus. This study examined growth and photosynthetic characteristics in glasshouse-grown seedlings and field-grown trees of Eucalyptus species that are commonly planted for forestry and revegetation purposes in central Victoria. Acclimation to light (among seedlings and within canopies), nutrient availability (phosphorus and nitrogen) and increased sink-strength for photosynthates were the primary foci of the study. In each instance I examined distribution of leaf nutrients within a canopy and allocation of N to Rubisco and chlorophyll to assess the degree to which nutrients limit photosynthesis in Eucalyptus. A novel technique was introduced to quantify the allocation of inorganic phosphorus within cells (cytoplasm versus vacuole), followed by an assessment of inorganic phosphorus allocation in response to a long-term reduction in phosphorus supply. In all circumstances, rates of growth were responsive to environmental conditions. Growth responses were underpinned by altered patterns of biomass partitioning and changed leaf morphology more than by rates of photosynthesis per se. There was little difference in adaptive strategies implemented by seedlings and trees: both were oriented towards the accumulation of nutrients rather than increasing rates of photosynthesis. Photosynthesis was reduced by shading (among different plants and within the canopy of a tree) and reduced phosphorus supply whereas N had little effect on photosynthesis. Analysis of pools of inorganic P revealed that adequate supplies were maintained for photosynthetic processes regardless of P supply, therefore reduced photosynthesis follows, rather than leads, a more general leaf-level response to reduced P. Similarly, changed partitioning of nitrogen between Rubisco and chlorophyll was unnecessary as leaf nitrogen concentrations were consistently maintained at well above published minimum levels. Hence, photosynthesis was not up-regulated following increased nitrogen or phosphorus supply; instead excess nutrients were accumulated and used to support increased biomass. One exception was after defoliation, when up-regulation of photosynthesis was observed, presumably to ensure the demand for photosynthates could be met by a reduced leaf area. Sensitivity analyses consistently revealed variation in photosynthetic rates owed more to altered biochemical activity (e.g. Jmax and Vcmax) rather than stomatal conductance regardless of growth condition (glasshouse versus field). Hence, whilst Eucalyptus has considerable photosynthetic potential, faster rates of carbon fixation are only exhibited in the short-term. In part, this is due to the multiplicity of factors involved in `optimisation' of photosynthesis and their individual and collective responses to environmental conditions. In the long term however, increased canopy photosynthetic capacity follows only an increased photosynthetic area.
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    Grazing ecology and high producing dairy cows
    Stockdale, C. R (1948-) ( 2005)
    This body of work (82 papers in scientific journals and 2 books) encompasses two broad areas of work. They are 1) growth, nutritive value and management of pastures grazed by dairy cows (40 publications), and 2) supplements for grazing dairy cows, with a particular focus on responses associated with supplement use and digestion in the rumen (44 publications). These two areas of research are inextricably linked and, taken together, have been termed `Grazing Ecology'. Of the 84 publications included, the candidate was the senior or sole author of 67% of them. The chronological development of the work reported includes research on stocking rates reported in the early 1980's through to the development of Diet Check, a decision support tool incorporating much of the information generated during the previous two decades, in the early 2000's. The publications cover aspects of grazing management to optimise growth, persistence and nutritive value of irrigated annual and perennial pastures for dairy cows. Most of this research has incorporated some aspect of stocking rate, whether it be stocking rate per se in long term experiments or frequency and/or intensity of defoliation in shorter term experiments. The aim was to establish optimum grazing strategies that best effected the compromise of maximum intake of pasture of high nutritive value while satisfying the requirements for maintenance of pasture growth and persistence of a balance of desirable pasture species. The research allowed the definition of the intake and nutritive characteristics of pasture grazed by lactating dairy cows under a range of management conditions. At the same time, strategies to effectively feed supplements were investigated. When more than one feed is offered to dairy cows, associative effects play an important role in the eventual responses achieved. Balance of nutrients, particularly in the rumen, and substitution of supplement for pasture in the diet of grazing dairy cows, were the main aspects of the associative effect between feeds considered in the research reported here. Substitution can have a huge effect on the responses obtained from supplements, and the type of supplement, by influencing the balance of nutrients ingested into the rumen, affects the composition of the milk produced. Finally, some attempt has been made to draw much of the information on pasture management and supplementation of grazing dairy cows together for use by dairy farmers and their advisers, and to define gaps in knowledge. This has been done by reviewing the scientific literature, and by the use of modelling to provide simple tools for tactical decision making. Although the research was undertaken in northern Victoria, many of the results apply equally in other areas of the world where pasture constitutes a major proportion of the diet of dairy cows. Victoria currently produces more than 60% of Australia's milk, with northern Victoria producing more than 40% of that. The development of dairying in Victoria mirrors much of the progress of the research reported in this collection of scientific publications. Before 1982, dairy farming was almost totally based on grazed pastures and the use of pasture supplements (hay and silage). A severe drought occurred in 1982, which prompted a serious consideration of the use of supplements for lactating cows grazing pasture. Today, dairy systems in Victoria vary to a huge extent, with the energy provided by pasture ranging from 0 to 100%. Over this period, average milk production has increased, from about 3000L/cow per lactation to more than 5000L/cow. With a fine line separating profit and loss in dairy businesses that basically depend on the price received for manufactured products on overseas markets, both grazed pasture and supplements need to be used optimally. The challenge has been to provide information and tools to allow dairy farmers to achieve this objective. I believe that my research, particularly in relation to pasture intake, substitution and associative effects, has been instrumental in allowing pasture-based dairy farmers to continue to remain viable in Australia, and that many of the principles developed apply wherever pasture constitutes a significant proportion of a cow's diet.
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    An evaluation of fuel-reduction burning in the dry sclerophyll Wombat State Forest
    Wibowo, Ari ( 1994)
    Each year, between one and three per cent of the total forested area in Victoria is fuel-reduced as a part of the Department of Conservation and Natural Resources' program to implement its overall fire protection policy. The dry sclerophyll Wombat State Forest has been fuel-reduced since the 1960's, - a practise considered important because of its susceptibility to fire and its highly flammable plant community. This thesis presents the results of an evaluation of fuel-reduction burning in the Wombat State Forest, commencing with a review of forest conditions, principles of fuel-reduction burning, fire behaviour and fire effects. This is followed by observations and measurements in the field to document current practices of fuel-reduction burning, to select an appropriate fire-behaviour prediction model, to identify time-intervals between successive burns and to evaluate the effects of fuel-reduction burning on forest trees. Historical data of wildfires were used to evaluate the effectiveness of fuel-reduction burning in limiting the number, area and losses from wildfires. "Multi-criteria analysis" was then applied to select priority areas for fuel-reduction burning. The fuel-reduction burning program which is conducted 'every year during autumn and spring requires detailed planning and preparation, because it can only be carried out under certain prescriptions for weather, fuel and fire behaviour. Depending on the extent and conditions of each area, either ground or aerial ignition is applied. Large areas ignited from the air often result in variations of fire behaviour and intensity that leave many un-burnt patches within the broad areas of burnt forest. In order to predict fire-behaviour, comparisons were made between the Control Burning Meter, the McArthur Fire Danger Meter and the Fire Behaviour Tables for Western Australia (the Red Book). From a study of small trial plots, it was shown that the fire behaviour model incorporated in the Control Burning Meter for messmate-gum or silvertop forest type provided quite realistic predictions of low-intensity prescribed fires compared with predictions based on the McArthur Forest Fire Danger Meter and the Fire Behaviour Tables for Western Australia. Since its inception, fuel-reduction burning in the Wombat State Forest has decreased the quantity of litter and twigs, but it has had no significant effect on the quantity of humus and coarse fuels. This reduction of flammable fuels has reduced the potential for major fires and the study showed that a fuel-reduction burning cycle of less than five years is required to restrict the build up of fine fuels to acceptable levels. With regard to the impact of fuel-reduction burning, it was shown that it causes scorches on most trees, and that there is a significant relationship between scorch-height and tree diameter for the two dominant species, messmate (Eucalyptus obliqua L'Herit) and peppermint (E. radiata Sieb. ex. DC.). However, because of their different bark types, average scorch height was higher for messmate. Due to the considerable variation in the severity of fire seasons, hence in the frequency and severity of fire, no significant differences were detected in the number of wildfires and the extent of areas burnt, before and after the application of fuel-reduction burning in the Wombat State Forest. However, analysis of the historical fire data led to the conclusion that fuel-reduction burning has achieved its objective of limiting the severity of wildfires. Most of the wildfires occurred on areas that either had never been fuel-reduced or that had been fuel-reduced for more than five years. The costs of fuel-reduction burning have been relatively modest in comparison with the potential losses. Therefore, when properly planned and implemented, fuel-reduction burning is a valuable management tool for protecting forests and wider community values. This study has also provided a general idea on the applicability of "multi-criteria analysis" for identifying priority areas for fuel-reduction burning in the Wombat State Forest, with priority areas being selected on the basis of level of fire hazard (fuel, weather and topographical conditions) and values of particular sites (significant values, timber quality, distance from the nearest township and extent of the area). The result was a ranking of areas according to their priorities for burning.
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