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dc.contributor.authorDagley, MJ
dc.contributor.authorMcConville, MJ
dc.date.accessioned2020-12-18T03:58:16Z
dc.date.available2020-12-18T03:58:16Z
dc.date.issued2018-06-01
dc.identifierpii: 4816793
dc.identifier.citationDagley, M. J. & McConville, M. J. (2018). DExSI: a new tool for the rapid quantitation of C-13-labelled metabolites detected by GC-MS. BIOINFORMATICS, 34 (11), pp.1957-1958. https://doi.org/10.1093/bioinformatics/bty025.
dc.identifier.issn1367-4803
dc.identifier.urihttp://hdl.handle.net/11343/255999
dc.description.abstractSummary: Stable isotope directed metabolomics is increasingly being used to measure metabolic fluxes in microbial, plant and animal cells. Incorporation of 13C/15N isotopes into a wide range of metabolites is typically determined using gas chromatography-mass spectrometry (GC/MS) or other hyphenated mass spectrometry approaches. The DExSI (Data Extraction for Stable Isotope-labelled metabolites) pipeline is an interactive graphical software package which can be used to rapidly quantitate isotopologues for a wide variety of metabolites detected by GC/MS. DExSI performs automated metabolite annotation, mass and positional isotopomer abundance determination and natural isotope abundance correction. It provides a range of output options and is suitable for high throughput analyses. Availability and implementation: DExSI is available for non-commercial use from: https://github.com/DExSI/DExSI/. For Microsoft Windows 7 or higher (64-bit). Contact: malcolmm@unimelb.edu.au or michael.dagley@unimelb.edu.au. Supplementary information: Supplementary data are available at Bioinformatics online.
dc.languageEnglish
dc.publisherOXFORD UNIV PRESS
dc.titleDExSI: a new tool for the rapid quantitation of C-13-labelled metabolites detected by GC-MS
dc.typeJournal Article
dc.identifier.doi10.1093/bioinformatics/bty025
melbourne.affiliation.departmentBiochemistry and Molecular Biology
melbourne.affiliation.departmentBio21
melbourne.source.titleBioinformatics
melbourne.source.volume34
melbourne.source.issue11
melbourne.source.pages1957-1958
dc.rights.licenseCC BY-NC
melbourne.elementsid1300778
melbourne.contributor.authorMcConville, Malcolm
melbourne.contributor.authorDagley, Michael
dc.identifier.eissn1460-2059
melbourne.accessrightsOpen Access


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