Ten recommendations for creating usable bioinformatics command line software

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    Author
    Seemann, T
    Date
    2013-01-01
    Source Title
    GigaScience
    Publisher
    BIOMED CENTRAL LTD
    University of Melbourne Author/s
    Seemann, Torsten
    Affiliation
    Microbiology and Immunology
    Metadata
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    Document Type
    Journal Article
    Citations
    Seemann, T. (2013). Ten recommendations for creating usable bioinformatics command line software. GIGASCIENCE, 2 (1), https://doi.org/10.1186/2047-217X-2-15.
    Access Status
    Open Access
    URI
    http://hdl.handle.net/11343/260385
    DOI
    10.1186/2047-217X-2-15
    Abstract
    Bioinformatics software varies greatly in quality. In terms of usability, the command line interface is the first experience a user will have of a tool. Unfortunately, this is often also the last time a tool will be used. Here I present ten recommendations for command line software author's tools to follow, which I believe would greatly improve the uptake and usability of their products, waste less user's time, and improve the quality of scientific analyses.

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