BioNessie: a grid enabled biochemical networks simulation environment
AuthorLIU, XUAN; Jiang, Jipu; Ajayi, Oluwafemi; Gu, Xu; Gilbert, David; SINNOTT, RICHARD
Source TitleHealthGrid 2008 Conference
University of Melbourne Author/sSinnott, Richard
Document TypeConference Paper
CitationsLiu, X., Jiang, J., Ajayi, O., Gu, X., Gilbert, D., & Sinnott, R. (2008). BioNessie: a grid enabled biochemical networks simulation environment. In HealthGrid 2008 Conference, Chicago, USA.
Access StatusOpen Access
This is a preprint of a paper from the HealthGrid 2008 Conference published by HealthGrid. http://chicago2008.healthgrid.org/
The simulation of biochemical networks provides insight and understanding about the underlying biochemical processes and pathways used by cells and organisms. BioNessie is a biochemical network simulator which has been developed at the University of Glasgow. This paper describes the simulator and focuses in particular on how it has been extended to benefit from a wide variety of high performance compute resources across the UK through Grid technologies to support larger scale simulations.
Keywordsnetwork simulation; biochemical networks; BioNessie; grid technology
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