BioNessie: a grid enabled biochemical networks simulation environment

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    Author
    LIU, XUAN; Jiang, Jipu; Ajayi, Oluwafemi; Gu, Xu; Gilbert, David; SINNOTT, RICHARD
    Date
    2008
    Source Title
    HealthGrid 2008 Conference
    Publisher
    HealthGrid
    University of Melbourne Author/s
    Sinnott, Richard
    Affiliation
    Computing and Information Systems
    Metadata
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    Document Type
    Conference Paper
    Citations
    Liu, X., Jiang, J., Ajayi, O., Gu, X., Gilbert, D., & Sinnott, R. (2008). BioNessie: a grid enabled biochemical networks simulation environment. In HealthGrid 2008 Conference, Chicago, USA.
    Access Status
    Open Access
    URI
    http://hdl.handle.net/11343/28858
    Description

    This is a preprint of a paper from the HealthGrid 2008 Conference published by HealthGrid. http://chicago2008.healthgrid.org/
    Abstract
    The simulation of biochemical networks provides insight and understanding about the underlying biochemical processes and pathways used by cells and organisms. BioNessie is a biochemical network simulator which has been developed at the University of Glasgow. This paper describes the simulator and focuses in particular on how it has been extended to benefit from a wide variety of high performance compute resources across the UK through Grid technologies to support larger scale simulations.
    Keywords
    network simulation; biochemical networks; BioNessie; grid technology

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