Science Collected Works - Research Publications
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Scientific Assessment of Ozone Depletion: 2010
(World Meteorological O, 2010)
European newts establish in Australia, marking the arrival of a new amphibian order
(SPRINGER, 2015-01-01)
We document the successful establishment of a European newt (Lissotriton vulgaris) in south-eastern Australia, the first recorded case of a caudate species establishing beyond its native geographic range in the southern hemisphere. Field surveys in south-eastern Australia detected L. vulgaris at six sites, including four sites where the species had been detected 15 months earlier. Larvae were detected at three sites. Individuals had identical NADH dehydrogenase subunit 2 and cytb mtDNA gene sequences, and comparisons with genetic data from the species' native range suggest that these individuals belong to the nominal subspecies L. v. vulgaris. Climatic conditions across much of southern Australia are similar to those experienced within the species' native range, suggesting scope for substantial range expansion. Lissotriton vulgaris had been available in the Australian pet trade for decades before it was declared a 'controlled pest animal' in 1997, and thus the invasion documented here likely originated via the release or escape of captive animals. Lissotriton vulgaris is the sole member of an entire taxonomic order to have established in Australia, and given the potential toxicity of this species, further work is needed to delimit its current range and identify potential biodiversity impacts. © 2014 Springer International Publishing Switzerland.
Microbial contributions to coupled arsenic and sulfur cycling in the acid-sulfide hot spring Champagne Pool, New Zealand
(FRONTIERS MEDIA SA, 2014-11-04)
Acid-sulfide hot springs are analogs of early Earth geothermal systems where microbial metal(loid) resistance likely first evolved. Arsenic is a metalloid enriched in the acid-sulfide hot spring Champagne Pool (Waiotapu, New Zealand). Arsenic speciation in Champagne Pool follows reaction paths not yet fully understood with respect to biotic contributions and coupling to biogeochemical sulfur cycling. Here we present quantitative arsenic speciation from Champagne Pool, finding arsenite dominant in the pool, rim and outflow channel (55-75% total arsenic), and dithio- and trithioarsenates ubiquitously present as 18-25% total arsenic. In the outflow channel, dimethylmonothioarsenate comprised ≤9% total arsenic, while on the outflow terrace thioarsenates were present at 55% total arsenic. We also quantified sulfide, thiosulfate, sulfate and elemental sulfur, finding sulfide and sulfate as major species in the pool and outflow terrace, respectively. Elemental sulfur concentration reached a maximum at the terrace. Phylogenetic analysis of 16S rRNA genes from metagenomic sequencing revealed the dominance of Sulfurihydrogenibium at all sites and an increased archaeal population at the rim and outflow channel. Several phylotypes were found closely related to known sulfur- and sulfide-oxidizers, as well as sulfur- and sulfate-reducers. Bioinformatic analysis revealed genes underpinning sulfur redox transformations, consistent with sulfur speciation data, and illustrating a microbial role in sulfur-dependent transformation of arsenite to thioarsenate. Metagenomic analysis also revealed genes encoding for arsenate reductase at all sites, reflecting the ubiquity of thioarsenate and a need for microbial arsenate resistance despite anoxic conditions. Absence of the arsenite oxidase gene, aio, at all sites suggests prioritization of arsenite detoxification over coupling to energy conservation. Finally, detection of methyl arsenic in the outflow channel, in conjunction with increased sequences from Aquificaceae, supports a role for methyltransferase in thermophilic arsenic resistance. Our study highlights microbial contributions to coupled arsenic and sulfur cycling at Champagne Pool, with implications for understanding the evolution of microbial arsenic resistance in sulfidic geothermal systems.
Estimating Detection Rates and Probabilities
(CABI PUBLISHING-C A B INT, 2015-01-01)
Quantitative Approaches Frith Jarrad, Samantha Low-Choy, Kerrie Mengersen ...
CAB International 2015. Biosecurity Surveillance: Quantitative Approaches (eds
1 Introduction to Biosecurity Surveillance: Quantitative Approaches.
Global Drivers and Tradeoffs of Three Urban Vegetation Ecosystem Services
(PUBLIC LIBRARY SCIENCE, 2014-11-17)
Our world is increasingly urbanizing which is highlighting that sustainable cities are essential for maintaining human well-being. This research is one of the first attempts to globally synthesize the effects of urbanization on ecosystem services and how these relate to governance, social development and climate. Three urban vegetation ecosystem services (carbon storage, recreation potential and habitat potential) were quantified for a selection of a hundred cities. Estimates of ecosystem services were obtained from the analysis of satellite imagery and the use of well-known carbon and structural habitat models. We found relationships between ecosystem services, social development, climate and governance, however these varied according to the service studied. Recreation potential was positively related to democracy and negatively related to population. Carbon storage was weakly related to temperature and democracy, while habitat potential was negatively related to democracy. We found that cities under 1 million inhabitants tended to have higher levels of recreation potential than larger cities and that democratic countries have higher recreation potential, especially if located in a continental climate. Carbon storage was higher in full democracies, especially in a continental climate, while habitat potential tended to be higher in authoritarian and hybrid regimes. Similar to other regional or city studies we found that the combination of environment conditions, socioeconomics, demographics and politics determines the provision of ecosystem services. Results from this study showed the existence of environmental injustice in the developing world.
Characterisation of the Fusarium graminearum-Wheat Floral Interaction.
(2011)
Fusarium Ear Blight is a destructive fungal disease of cereals including wheat and can contaminate the crop with various trichothecene mycotoxins. This investigation has produced a new β-glucuronidase (GUS) reporter strain that facilitates the quick and easy assessment of plant infection. The constitutively expressed gpdA:GUS strain of Fusarium graminearum was used to quantify the overall colonisation pattern. Histochemical and biochemical approaches confirmed, in susceptible wheat ear infections, the presence of a substantial phase of symptomless fungal growth. Separate analyses demonstrated that there was a reduction in the quantity of physiologically active hyphae as the wheat ear infection proceeded. A simplified linear system of rachis infection was then utilised to evaluate the expression of several TRI genes by RT-qPCR. Fungal gene expression at the advancing front of symptomless infection was compared with the origin of infection in the rachis. This revealed that TRI gene expression was maximal at the advancing front and supports the hypothesis that the mycotoxin deoxynivalenol plays a role in inhibiting plant defences in advance of the invading intercellular hyphae. This study has also demonstrated that there are transcriptional differences between the various phases of fungal infection and that these differences are maintained as the infection proceeds.
Tasmante Swath-Mapping and Reflection Seismic Cruise off Tasmania using RV L'Atalante - AGSO Cruise 125 Report
(Australian Geological Survey Organisation, 1994)
Final Report on the Rediscover Victoria Drilling Initiative 2007-2011. GeoScience Victoria Rediscover Victoria Drilling Report 1. Department of Primary Industries.
(GeoScience Victoria, Department of Primary Industries, The State of Victoria, 2011)







